Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC079140.5-201ENST00000507882 310 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AC008526.1-201ENST00000509149 338 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD8P13378 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXD8P13378 AL133271.1-201ENST00000538229 291 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXD8P13378 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD8P13378 AC018552.1-201ENST00000562099 811 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD8P13378 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD8P13378 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AC025588.3-201ENST00000604182 274 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AL022394.1-201ENST00000606979 292 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AC023813.4-201ENST00000607580 580 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AL161616.1-201ENST00000611867 286 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD8P13378 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD8P13378 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXD8P13378 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD8P13378 AC009313.2-201ENST00000417893 1941 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HOXD8P13378 AC004158.1-201ENST00000564508 4319 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD8P13378 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HOXD8P13378 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 TPTE2P4-201ENST00000258589 1605 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 AC079741.1-201ENST00000321498 212 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXD8P13378 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 RNU6-188P-201ENST00000364207 107 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD8P13378 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 SNORA24.1-201ENST00000384401 135 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 API5P2-201ENST00000397055 1498 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 E2F6P2-201ENST00000420708 748 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 AL591212.2-201ENST00000433923 257 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 ZNF519P1-201ENST00000449011 1626 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 RPL21P8-201ENST00000465083 535 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXD8P13378 RN7SL809P-201ENST00000482040 297 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 RN7SL441P-201ENST00000492388 296 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD8P13378 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD8P13378 AC097486.1-201ENST00000515331 210 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 MTCO1P24-201ENST00000515438 1558 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD8P13378 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXD8P13378 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD8P13378 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 AC091042.1-201ENST00000579213 173 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 MIR3667-201ENST00000581025 74 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 MIR4270-201ENST00000581799 70 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 PRR13P7-201ENST00000605538 430 ntBASIC5.61□□□□□ -1.51
HOXD8P13378 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXD8P13378 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXD8P13378 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXD8P13378 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXD8P13378 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 BDP1P-201ENST00000582658 1990 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD8P13378 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD8P13378 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXD8P13378 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 RNU6-562P-201ENST00000362731 107 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 SNORD3E-201ENST00000362899 217 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 RNU1-130P-201ENST00000363930 160 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 Y_RNA.252-201ENST00000364556 101 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXD8P13378 Y_RNA.463-201ENST00000384271 102 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 NDUFS5P1-201ENST00000405668 289 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD8P13378 AC114491.1-201ENST00000416095 246 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD8P13378 AC093151.1-201ENST00000427711 313 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 RPL36AP6-201ENST00000435770 321 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 RPL7P28-201ENST00000437739 740 ntBASIC5.6□□□□□ -1.51
HOXD8P13378 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD8P13378 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXD8P13378 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXD8P13378 AC010733.1-201ENST00000451515 401 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms