Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MMP3P08254 RN7SKP44-201ENST00000363602 316 ntBASIC4.04□□□□□ -1.76
MMP3P08254 RNU1-33P-201ENST00000364249 162 ntBASIC4.04□□□□□ -1.76
MMP3P08254 RNY3P10-201ENST00000384764 102 ntBASIC4.04□□□□□ -1.76
MMP3P08254 SSXP10-201ENST00000402595 565 ntBASIC4.04□□□□□ -1.76
MMP3P08254 NDUFB4P4-201ENST00000404822 243 ntBASIC4.04□□□□□ -1.76
MMP3P08254 RNA5SP306-201ENST00000411087 107 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 DBIP2-201ENST00000419076 262 ntBASIC4.04□□□□□ -1.76
MMP3P08254 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 MTND4P6-201ENST00000438297 472 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.04□□□□□ -1.76
MMP3P08254 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.04□□□□□ -1.76
MMP3P08254 USP9YP29-201ENST00000445112 563 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC010655.1-201ENST00000449336 292 ntBASIC4.04□□□□□ -1.76
MMP3P08254 TRBV26-201ENST00000456572 344 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 RPL37P6-202ENST00000464216 403 ntBASIC4.04□□□□□ -1.76
MMP3P08254 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MMP3P08254 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.04□□□□□ -1.76
MMP3P08254 AC022880.1-201ENST00000534017 973 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.04□□□□□ -1.76
MMP3P08254 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.04□□□□□ -1.76
MMP3P08254 PCMTD1P2-201ENST00000565017 355 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.04□□□□□ -1.76
MMP3P08254 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.04□□□□□ -1.76
MMP3P08254 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 AC012065.4-201ENST00000602445 679 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC025588.3-201ENST00000604182 274 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.04□□□□□ -1.76
MMP3P08254 AC012360.2-201ENST00000609349 391 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 AC025594.3-201ENST00000613068 790 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AL355365.1-201ENST00000616480 294 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC099842.1-201ENST00000619919 596 ntBASIC4.04□□□□□ -1.76
MMP3P08254 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 AC025048.6-202ENST00000627667 438 ntBASIC4.04□□□□□ -1.76
MMP3P08254 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MMP3P08254 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MMP3P08254 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
MMP3P08254 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
MMP3P08254 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 AC130650.2-201ENST00000618736 2403 ntBASIC4.03□□□□□ -1.76
MMP3P08254 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MMP3P08254 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
MMP3P08254 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.03□□□□□ -1.76
MMP3P08254 RNU6-952P-201ENST00000391164 108 ntBASIC4.03□□□□□ -1.76
MMP3P08254 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.03□□□□□ -1.76
MMP3P08254 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.03□□□□□ -1.76
MMP3P08254 HMGB3P20-201ENST00000417997 600 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.03□□□□□ -1.76
MMP3P08254 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.03□□□□□ -1.76
MMP3P08254 CYCSP32-201ENST00000440548 321 ntBASIC4.03□□□□□ -1.76
MMP3P08254 BMI1P1-201ENST00000445879 941 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.03□□□□□ -1.76
MMP3P08254 AC005297.2-201ENST00000450430 606 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.03□□□□□ -1.76
MMP3P08254 AL645939.1-201ENST00000453429 797 ntBASIC4.03□□□□□ -1.76
MMP3P08254 RN7SL601P-201ENST00000471221 293 ntBASIC4.03□□□□□ -1.76
MMP3P08254 HMGB1P36-201ENST00000487709 576 ntBASIC4.03□□□□□ -1.76
MMP3P08254 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.03□□□□□ -1.76
MMP3P08254 AC114981.1-201ENST00000503897 678 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AC026784.1-201ENST00000507986 352 ntBASIC4.03□□□□□ -1.76
MMP3P08254 CBX3P3-201ENST00000508108 532 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AF131216.2-201ENST00000512316 564 ntBASIC4.03□□□□□ -1.76
MMP3P08254 MTND5P4-201ENST00000514978 288 ntBASIC4.03□□□□□ -1.76
MMP3P08254 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.03□□□□□ -1.76
MMP3P08254 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.03□□□□□ -1.76
MMP3P08254 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.03□□□□□ -1.76
MMP3P08254 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.03□□□□□ -1.76
MMP3P08254 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MMP3P08254 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.03□□□□□ -1.76
MMP3P08254 AL139174.1-201ENST00000531489 886 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AP000873.5-201ENST00000533906 236 ntBASIC4.03□□□□□ -1.76
MMP3P08254 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
MMP3P08254 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.03□□□□□ -1.76
MMP3P08254 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.03□□□□□ -1.76
MMP3P08254 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.03□□□□□ -1.76
MMP3P08254 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.03□□□□□ -1.76
MMP3P08254 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.03□□□□□ -1.76
MMP3P08254 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.03□□□□□ -1.76
MMP3P08254 AC097468.3-201ENST00000607956 456 ntBASIC4.03□□□□□ -1.76
MMP3P08254 MIR7851-201ENST00000610611 160 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AC013562.2-201ENST00000611632 603 ntBASIC4.03□□□□□ -1.76
MMP3P08254 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.03□□□□□ -1.76
MMP3P08254 AC084035.1-201ENST00000634543 607 ntBASIC4.03□□□□□ -1.76
MMP3P08254 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
MMP3P08254 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
MMP3P08254 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
MMP3P08254 MTND4P5-201ENST00000435821 1374 ntBASIC4.02□□□□□ -1.77
MMP3P08254 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
MMP3P08254 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
MMP3P08254 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
MMP3P08254 Y_RNA.97-201ENST00000363094 102 ntBASIC4.02□□□□□ -1.77
MMP3P08254 MIR634-201ENST00000385208 97 ntBASIC4.02□□□□□ -1.77
MMP3P08254 DEFB108C-201ENST00000400154 252 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 164.7 ms