Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
MT-ND4P03905 MIR217-201ENST00000384817 110 ntBASIC2.55□□□□□ -2
MT-ND4P03905 SNORD67-201ENST00000390833 111 ntBASIC2.55□□□□□ -2
MT-ND4P03905 U3.29-201ENST00000391296 212 ntBASIC2.55□□□□□ -2
MT-ND4P03905 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.55□□□□□ -2
MT-ND4P03905 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
MT-ND4P03905 AL133264.1-201ENST00000407157 562 ntBASIC2.55□□□□□ -2
MT-ND4P03905 RNU6-712P-201ENST00000410558 100 ntBASIC2.55□□□□□ -2
MT-ND4P03905 RPL19P1-201ENST00000411635 428 ntBASIC2.55□□□□□ -2
MT-ND4P03905 RAP1BP1-201ENST00000412709 553 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.55□□□□□ -2
MT-ND4P03905 MTCO3P12-201ENST00000416718 547 ntBASIC2.55□□□□□ -2
MT-ND4P03905 BOLA3P4-201ENST00000418151 400 ntBASIC2.55□□□□□ -2
MT-ND4P03905 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC079780.1-201ENST00000428259 207 ntBASIC2.55□□□□□ -2
MT-ND4P03905 MTCYBP15-201ENST00000433123 1127 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.55□□□□□ -2
MT-ND4P03905 ARL4AP4-201ENST00000434170 518 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.55□□□□□ -2
MT-ND4P03905 AC016696.1-201ENST00000446949 318 ntBASIC2.55□□□□□ -2
MT-ND4P03905 COX6CP18-201ENST00000448769 222 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.55□□□□□ -2
MT-ND4P03905 BTF3P5-201ENST00000457252 467 ntBASIC2.55□□□□□ -2
MT-ND4P03905 RPS20P24-201ENST00000457473 361 ntBASIC2.55□□□□□ -2
MT-ND4P03905 RN7SL297P-201ENST00000483161 293 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AP002812.1-201ENST00000495378 474 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.55□□□□□ -2
MT-ND4P03905 OR4R2P-201ENST00000530815 597 ntBASIC2.55□□□□□ -2
MT-ND4P03905 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.55□□□□□ -2
MT-ND4P03905 CCNG2P1-201ENST00000549521 1000 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.55□□□□□ -2
MT-ND4P03905 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.55□□□□□ -2
MT-ND4P03905 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.55□□□□□ -2
MT-ND4P03905 MIR4666A-201ENST00000580160 79 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.55□□□□□ -2
MT-ND4P03905 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.55□□□□□ -2
MT-ND4P03905 UBL5P2-201ENST00000583788 219 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.55□□□□□ -2
MT-ND4P03905 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.55□□□□□ -2
MT-ND4P03905 AC090330.1-201ENST00000588646 764 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.55□□□□□ -2
MT-ND4P03905 AL606834.2-201ENST00000602954 668 ntBASIC2.55□□□□□ -2
MT-ND4P03905 ELOCP35-201ENST00000604289 336 ntBASIC2.55□□□□□ -2
MT-ND4P03905 AC244517.1-201ENST00000606030 2086 ntBASIC2.55□□□□□ -2
MT-ND4P03905 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.55□□□□□ -2
MT-ND4P03905 AC139713.2-210ENST00000641741 992 ntBASIC2.55□□□□□ -2
MT-ND4P03905 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
MT-ND4P03905 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
MT-ND4P03905 AC092447.7-201ENST00000422212 1621 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC073325.2-201ENST00000339545 159 ntBASIC2.54□□□□□ -2
MT-ND4P03905 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.54□□□□□ -2
MT-ND4P03905 SNORA51.6-201ENST00000384151 125 ntBASIC2.54□□□□□ -2
MT-ND4P03905 U3.19-201ENST00000390893 196 ntBASIC2.54□□□□□ -2
MT-ND4P03905 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.54□□□□□ -2
MT-ND4P03905 KRR1P1-201ENST00000419430 803 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.54□□□□□ -2
MT-ND4P03905 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.54□□□□□ -2
MT-ND4P03905 AC005326.1-201ENST00000429197 123 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND4P03905 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND4P03905 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND4P03905 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.54□□□□□ -2
MT-ND4P03905 RPS29P2-201ENST00000479278 136 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.54□□□□□ -2
MT-ND4P03905 AC096751.1-202ENST00000502691 1067 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC093767.1-201ENST00000504523 156 ntBASIC2.54□□□□□ -2
MT-ND4P03905 WBP1LP4-201ENST00000505043 344 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC026412.2-201ENST00000512270 1075 ntBASIC2.54□□□□□ -2
MT-ND4P03905 MTCO3P27-201ENST00000514397 196 ntBASIC2.54□□□□□ -2
MT-ND4P03905 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.54□□□□□ -2
MT-ND4P03905 AP003355.1-201ENST00000518956 587 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AP001317.1-201ENST00000531194 960 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AP000857.1-201ENST00000532151 543 ntBASIC2.54□□□□□ -2
MT-ND4P03905 CYB5AP5-201ENST00000549779 389 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.54□□□□□ -2
MT-ND4P03905 SULT1C2P1-202ENST00000562418 459 ntBASIC2.54□□□□□ -2
MT-ND4P03905 MIR5680-201ENST00000577577 84 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.54□□□□□ -2
MT-ND4P03905 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.54□□□□□ -2
MT-ND4P03905 AC012669.1-201ENST00000603209 283 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC245389.1-201ENST00000605141 529 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC084824.5-201ENST00000612009 413 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC008083.4-201ENST00000615076 444 ntBASIC2.54□□□□□ -2
MT-ND4P03905 Z99129.2-201ENST00000619967 314 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC092650.2-201ENST00000619984 902 ntBASIC2.54□□□□□ -2
MT-ND4P03905 AC009039.2-201ENST00000624524 529 ntBASIC2.54□□□□□ -2
MT-ND4P03905 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
MT-ND4P03905 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.54□□□□□ -2
MT-ND4P03905 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
MT-ND4P03905 GABRG2-229ENST00000641017 3628 ntBASIC2.54□□□□□ -2
MT-ND4P03905 NUP58P1-201ENST00000502546 1738 ntBASIC2.54□□□□□ -2
MT-ND4P03905 FAM35BP-202ENST00000497389 3337 ntBASIC2.53□□□□□ -2
MT-ND4P03905 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.53□□□□□ -2
MT-ND4P03905 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
MT-ND4P03905 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.53□□□□□ -2
MT-ND4P03905 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.53□□□□□ -2
MT-ND4P03905 TMSB4XP8-201ENST00000402089 135 ntBASIC2.53□□□□□ -2
MT-ND4P03905 AL355615.1-201ENST00000406187 641 ntBASIC2.53□□□□□ -2
MT-ND4P03905 U3.42-201ENST00000408746 214 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms