Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC069306.1-201ENST00000507006 843 ntBASIC2.72□□□□□ -1.97
APOEP02649 AC008885.2-201ENST00000509506 930 ntBASIC2.72□□□□□ -1.97
APOEP02649 MTCO3P44-201ENST00000510977 541 ntBASIC2.72□□□□□ -1.97
APOEP02649 AC105914.1-201ENST00000511798 226 ntBASIC2.72□□□□□ -1.97
APOEP02649 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
APOEP02649 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.72□□□□□ -1.97
APOEP02649 AC100870.1-201ENST00000522035 505 ntBASIC2.72□□□□□ -1.97
APOEP02649 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.72□□□□□ -1.97
APOEP02649 OR5AK3P-201ENST00000527486 1297 ntBASIC2.72□□□□□ -1.97
APOEP02649 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.72□□□□□ -1.97
APOEP02649 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.72□□□□□ -1.97
APOEP02649 AC006023.1-201ENST00000603944 259 ntBASIC2.72□□□□□ -1.97
APOEP02649 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.72□□□□□ -1.97
APOEP02649 AC242628.1-201ENST00000606810 391 ntBASIC2.72□□□□□ -1.97
APOEP02649 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
APOEP02649 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.72□□□□□ -1.97
APOEP02649 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
APOEP02649 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
APOEP02649 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOEP02649 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOEP02649 RNA5SP258-201ENST00000362750 119 ntBASIC2.71□□□□□ -1.98
APOEP02649 AL356057.2-201ENST00000403318 432 ntBASIC2.71□□□□□ -1.98
APOEP02649 RNA5SP38-201ENST00000410750 119 ntBASIC2.71□□□□□ -1.98
APOEP02649 RPLP0P7-201ENST00000416050 667 ntBASIC2.71□□□□□ -1.98
APOEP02649 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.71□□□□□ -1.98
APOEP02649 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.71□□□□□ -1.98
APOEP02649 UBE2V1P6-201ENST00000430840 422 ntBASIC2.71□□□□□ -1.98
APOEP02649 MRPS33P4-201ENST00000434892 317 ntBASIC2.71□□□□□ -1.98
APOEP02649 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.71□□□□□ -1.98
APOEP02649 LSM1P1-201ENST00000438629 273 ntBASIC2.71□□□□□ -1.98
APOEP02649 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOEP02649 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.71□□□□□ -1.98
APOEP02649 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.71□□□□□ -1.98
APOEP02649 AC119751.5-201ENST00000514077 770 ntBASIC2.71□□□□□ -1.98
APOEP02649 SNORA31.1-201ENST00000515993 133 ntBASIC2.71□□□□□ -1.98
APOEP02649 SNORA31.5-201ENST00000516190 133 ntBASIC2.71□□□□□ -1.98
APOEP02649 AC008676.3-201ENST00000521237 435 ntBASIC2.71□□□□□ -1.98
APOEP02649 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.71□□□□□ -1.98
APOEP02649 EIF1AXP2-201ENST00000555940 413 ntBASIC2.71□□□□□ -1.98
APOEP02649 AL356575.1-201ENST00000603008 283 ntBASIC2.71□□□□□ -1.98
APOEP02649 DUXAP3-201ENST00000603616 594 ntBASIC2.71□□□□□ -1.98
APOEP02649 BX664608.1-201ENST00000610519 487 ntBASIC2.71□□□□□ -1.98
APOEP02649 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOEP02649 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.71□□□□□ -1.98
APOEP02649 ZNF734P-201ENST00000419494 1534 ntBASIC2.71□□□□□ -1.98
APOEP02649 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOEP02649 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.7□□□□□ -1.98
APOEP02649 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOEP02649 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOEP02649 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
APOEP02649 ANAPC10P1-201ENST00000395991 556 ntBASIC2.7□□□□□ -1.98
APOEP02649 RPS4XP8-201ENST00000402039 771 ntBASIC2.7□□□□□ -1.98
APOEP02649 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.7□□□□□ -1.98
APOEP02649 SNRPEP4-201ENST00000435815 279 ntBASIC2.7□□□□□ -1.98
APOEP02649 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.7□□□□□ -1.98
APOEP02649 AC011816.1-201ENST00000441346 546 ntBASIC2.7□□□□□ -1.98
APOEP02649 RPS26P56-201ENST00000444468 240 ntBASIC2.7□□□□□ -1.98
APOEP02649 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.7□□□□□ -1.98
APOEP02649 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.7□□□□□ -1.98
APOEP02649 AC108938.1-201ENST00000451204 136 ntBASIC2.7□□□□□ -1.98
APOEP02649 AC008280.2-201ENST00000455473 307 ntBASIC2.7□□□□□ -1.98
APOEP02649 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.7□□□□□ -1.98
APOEP02649 RNF138P1-201ENST00000502765 546 ntBASIC2.7□□□□□ -1.98
APOEP02649 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.7□□□□□ -1.98
APOEP02649 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.7□□□□□ -1.98
APOEP02649 TBCAP3-201ENST00000512475 312 ntBASIC2.7□□□□□ -1.98
APOEP02649 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.7□□□□□ -1.98
APOEP02649 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.7□□□□□ -1.98
APOEP02649 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.7□□□□□ -1.98
APOEP02649 HMGB1P41-201ENST00000520234 440 ntBASIC2.7□□□□□ -1.98
APOEP02649 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.7□□□□□ -1.98
APOEP02649 AP003385.6-201ENST00000531603 374 ntBASIC2.7□□□□□ -1.98
APOEP02649 OSBPL9P3-201ENST00000534523 595 ntBASIC2.7□□□□□ -1.98
APOEP02649 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.7□□□□□ -1.98
APOEP02649 AC092470.1-201ENST00000546187 132 ntBASIC2.7□□□□□ -1.98
APOEP02649 MIR3162-201ENST00000581818 82 ntBASIC2.7□□□□□ -1.98
APOEP02649 CBX3P2-202ENST00000583365 535 ntBASIC2.7□□□□□ -1.98
APOEP02649 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.7□□□□□ -1.98
APOEP02649 AL390838.2-201ENST00000602394 274 ntBASIC2.7□□□□□ -1.98
APOEP02649 VIS1.1-201ENST00000610517 203 ntBASIC2.7□□□□□ -1.98
APOEP02649 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.7□□□□□ -1.98
APOEP02649 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.7□□□□□ -1.98
APOEP02649 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
APOEP02649 AL136360.1-201ENST00000503377 1900 ntBASIC2.7□□□□□ -1.98
APOEP02649 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
APOEP02649 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOEP02649 AC091564.4-201ENST00000533934 2194 ntBASIC2.69□□□□□ -1.98
APOEP02649 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
APOEP02649 FTLP6-201ENST00000355274 422 ntBASIC2.69□□□□□ -1.98
APOEP02649 RNU6-989P-201ENST00000362756 107 ntBASIC2.69□□□□□ -1.98
APOEP02649 RNU1-100P-201ENST00000365255 165 ntBASIC2.69□□□□□ -1.98
APOEP02649 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
APOEP02649 RNU6-1226P-201ENST00000384317 107 ntBASIC2.69□□□□□ -1.98
APOEP02649 RNU2-25P-201ENST00000411041 191 ntBASIC2.69□□□□□ -1.98
APOEP02649 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.69□□□□□ -1.98
APOEP02649 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
APOEP02649 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.69□□□□□ -1.98
APOEP02649 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.69□□□□□ -1.98
APOEP02649 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.69□□□□□ -1.98
APOEP02649 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms