Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.79□□□□□ -1.96
SEMA3DO95025 OR4A45P-201ENST00000529954 901 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 OR8K4P-201ENST00000534608 872 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.79□□□□□ -1.96
SEMA3DO95025 AC125611.2-201ENST00000551907 647 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.79□□□□□ -1.96
SEMA3DO95025 AC090695.1-201ENST00000561269 1222 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 AC074051.3-201ENST00000570238 358 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 SNORD39.3-201ENST00000584451 71 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.79□□□□□ -1.96
SEMA3DO95025 MIR8057-201ENST00000620957 69 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 AC002064.3-201ENST00000623448 346 ntBASIC2.79□□□□□ -1.96
SEMA3DO95025 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.79□□□□□ -1.96
SEMA3DO95025 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.79□□□□□ -1.96
SEMA3DO95025 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SEMA3DO95025 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SEMA3DO95025 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.78□□□□□ -1.96
SEMA3DO95025 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SEMA3DO95025 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SEMA3DO95025 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 RNU6-619P-201ENST00000365146 108 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AL138885.1-201ENST00000405921 675 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.78□□□□□ -1.96
SEMA3DO95025 RNA5SP56-201ENST00000410277 118 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 HMGN2P35-201ENST00000412164 270 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 KRR1P1-201ENST00000419430 803 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 RPL21P32-201ENST00000419877 477 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SEMA3DO95025 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.78□□□□□ -1.96
SEMA3DO95025 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.78□□□□□ -1.96
SEMA3DO95025 AL050341.1-201ENST00000447743 313 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC104073.1-201ENST00000451988 151 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 HMGN3P1-201ENST00000453847 193 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.78□□□□□ -1.96
SEMA3DO95025 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 snoU13.3-201ENST00000459441 104 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.78□□□□□ -1.96
SEMA3DO95025 AC083906.5-201ENST00000503722 328 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC009812.2-201ENST00000517657 457 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 FAM60DP-201ENST00000524174 632 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SEMA3DO95025 AC006518.2-201ENST00000542513 940 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.78□□□□□ -1.96
SEMA3DO95025 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.78□□□□□ -1.96
SEMA3DO95025 AC093510.2-201ENST00000562820 896 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.78□□□□□ -1.96
SEMA3DO95025 MTCO3P13-201ENST00000577757 781 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 BNIP3P22-201ENST00000593399 556 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC245036.5-201ENST00000596330 847 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AP002906.1-201ENST00000603405 233 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC103881.1-201ENST00000603476 538 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC015871.2-201ENST00000603605 948 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC096577.2-201ENST00000611455 153 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC090116.1-201ENST00000615679 446 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC018755.4-201ENST00000619715 454 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 MIR3651-201ENST00000630427 90 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 BX649567.1-201ENST00000642071 1134 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC099654.7-201ENST00000635788 2127 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 AC006378.2-201ENST00000623178 2476 ntBASIC2.78□□□□□ -1.96
SEMA3DO95025 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
SEMA3DO95025 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SEMA3DO95025 GABRG2-229ENST00000641017 3628 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 ASNSP3-201ENST00000451989 1306 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.77□□□□□ -1.97
SEMA3DO95025 RNU6-989P-201ENST00000362756 107 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 RNU1-35P-201ENST00000362782 153 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 SNORD46.1-201ENST00000364139 104 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 RNA5SP139-201ENST00000364340 117 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SEMA3DO95025 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SEMA3DO95025 FO393413.1-201ENST00000402892 195 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.77□□□□□ -1.97
SEMA3DO95025 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AL512637.2-201ENST00000431287 1256 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 RPS29P6-201ENST00000438196 145 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC104978.1-201ENST00000449387 391 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 RPL21P41-201ENST00000459863 264 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AP001992.1-205ENST00000462248 379 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.77□□□□□ -1.97
SEMA3DO95025 RPL9P33-201ENST00000484311 566 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC004062.1-201ENST00000509926 645 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.77□□□□□ -1.97
SEMA3DO95025 GMPSP1-201ENST00000514075 579 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AP000790.1-201ENST00000528891 737 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AL136520.1-202ENST00000555494 763 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms