Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC073901.1-201ENST00000462471 408 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 YWHAEP4-201ENST00000505390 198 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AC110794.1-201ENST00000505816 425 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOX2O60902 ATP5F1P5-201ENST00000526403 760 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHOX2O60902 AC087276.1-201ENST00000529659 480 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOX2O60902 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.78□□□□□ -1.96
SHOX2O60902 AC022069.1-201ENST00000582910 658 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.78□□□□□ -1.96
SHOX2O60902 SNORD84-203ENST00000584275 78 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AP001542.1-201ENST00000591314 200 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AL606834.2-201ENST00000602954 668 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 AL355802.4-201ENST00000607635 548 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 CR381572.1-201ENST00000625098 102 ntBASIC2.78□□□□□ -1.96
SHOX2O60902 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.78□□□□□ -1.96
SHOX2O60902 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHOX2O60902 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHOX2O60902 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
SHOX2O60902 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHOX2O60902 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHOX2O60902 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHOX2O60902 AL365361.1-201ENST00000566942 3481 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 RNA5SP27-201ENST00000363839 119 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.77□□□□□ -1.97
SHOX2O60902 U3.37-201ENST00000408528 213 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AC010881.1-201ENST00000433830 235 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.77□□□□□ -1.97
SHOX2O60902 HMGN3P1-201ENST00000453847 193 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 BTF3P5-201ENST00000457252 467 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AC109925.1-201ENST00000478069 331 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AIG1P1-201ENST00000503376 148 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AC097462.2-201ENST00000504623 481 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHOX2O60902 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.77□□□□□ -1.97
SHOX2O60902 AC004062.1-201ENST00000509926 645 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AC105914.1-201ENST00000511798 226 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 SNORA31.11-201ENST00000516528 139 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.77□□□□□ -1.97
SHOX2O60902 OR8K4P-201ENST00000534608 872 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AC233266.2-201ENST00000567067 528 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 ATP5F1P7-201ENST00000567330 760 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 VN1R88P-201ENST00000596787 292 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AP001033.2-201ENST00000609701 1003 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 SNHG22-203ENST00000617833 660 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AC018755.4-201ENST00000619715 454 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AL162233.1-201ENST00000620014 944 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 AC104820.1-201ENST00000624183 307 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 FO624990.1-201ENST00000636373 85 ntBASIC2.77□□□□□ -1.97
SHOX2O60902 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHOX2O60902 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SHOX2O60902 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
SHOX2O60902 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
SHOX2O60902 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SHOX2O60902 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SHOX2O60902 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.76□□□□□ -1.97
SHOX2O60902 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.76□□□□□ -1.97
SHOX2O60902 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.76□□□□□ -1.97
SHOX2O60902 SNORA80A-201ENST00000363922 136 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 U3.19-201ENST00000390893 196 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AL445529.1-201ENST00000398713 389 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 RNU4-78P-201ENST00000410940 126 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AL353678.1-201ENST00000422735 741 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AC233728.2-201ENST00000425348 757 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SHOX2O60902 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.76□□□□□ -1.97
SHOX2O60902 SNRPEP4-201ENST00000435815 279 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AC007000.2-201ENST00000442564 487 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.76□□□□□ -1.97
SHOX2O60902 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.76□□□□□ -1.97
SHOX2O60902 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.76□□□□□ -1.97
SHOX2O60902 AC132942.1-201ENST00000486753 483 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AC096576.1-201ENST00000489014 359 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 SRIP1-201ENST00000489235 288 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 OR5H5P-201ENST00000503164 928 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 HIGD1AP6-201ENST00000521833 279 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.76□□□□□ -1.97
SHOX2O60902 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.76□□□□□ -1.97
SHOX2O60902 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.76□□□□□ -1.97
SHOX2O60902 AC138761.3-201ENST00000579993 334 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 MIR4524B-201ENST00000581569 115 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 ZNF861P-201ENST00000588126 639 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AC135178.6-201ENST00000605314 398 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 AC026422.1-201ENST00000623961 452 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.76□□□□□ -1.97
SHOX2O60902 AL590396.2-201ENST00000636511 1041 ntBASIC2.76□□□□□ -1.97
SHOX2O60902 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SHOX2O60902 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 AC092435.3-201ENST00000565538 3654 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHOX2O60902 RNU1-109P-201ENST00000383960 147 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 RNU1-138P-201ENST00000384093 164 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SHOX2O60902 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.75□□□□□ -1.97
SHOX2O60902 YPEL5P1-201ENST00000419731 367 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.75□□□□□ -1.97
SHOX2O60902 ARL2BPP3-201ENST00000421226 480 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms