Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC072039.2-201ENST00000608883 439 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AP000254.1-201ENST00000609934 520 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC104073.3-201ENST00000610942 955 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.66□□□□□ -1.82
CACNA1FO60840 AL603755.1-201ENST00000619504 163 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 AC109454.4-201ENST00000623411 649 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1FO60840 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1FO60840 AC073055.1-201ENST00000456901 1621 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 SGO1P1-201ENST00000603525 1447 ntBASIC3.66□□□□□ -1.82
CACNA1FO60840 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.66□□□□□ -1.82
CACNA1FO60840 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CACNA1FO60840 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CACNA1FO60840 AL133412.1-201ENST00000380194 2992 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 METTL21EP-201ENST00000298105 713 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1FO60840 RNU6-623P-201ENST00000363143 105 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CACNA1FO60840 DNAJC19P6-201ENST00000401853 280 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.65□□□□□ -1.82
CACNA1FO60840 RPL7P44-201ENST00000424827 742 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 RN7SL633P-201ENST00000488974 297 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 AC107401.1-201ENST00000503426 685 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 snoZ278.1-201ENST00000517059 112 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 IGKV2D-23-201ENST00000518179 286 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1FO60840 PDCD5P1-201ENST00000543528 309 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CACNA1FO60840 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.65□□□□□ -1.82
CACNA1FO60840 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.65□□□□□ -1.82
CACNA1FO60840 MIR3912-201ENST00000577566 105 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 MIR3915-201ENST00000578518 97 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 AC107075.1-201ENST00000613695 314 ntBASIC3.65□□□□□ -1.82
CACNA1FO60840 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.65□□□□□ -1.82
CACNA1FO60840 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CACNA1FO60840 SNORD65C-201ENST00000390962 71 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.65□□□□□ -1.83
CACNA1FO60840 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 AC093716.1-201ENST00000435923 377 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 MTCO2P3-201ENST00000442543 421 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 MTND1P27-201ENST00000451117 902 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 USP9YP10-201ENST00000454868 628 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 SYPL1P1-201ENST00000473622 768 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 NIPA2P2-201ENST00000496376 1083 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 AC084024.2-201ENST00000503480 791 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.65□□□□□ -1.83
CACNA1FO60840 USP9YP5-201ENST00000511770 630 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.65□□□□□ -1.83
CACNA1FO60840 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.65□□□□□ -1.83
CACNA1FO60840 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CACNA1FO60840 GTF3AP2-201ENST00000557014 266 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.65□□□□□ -1.83
CACNA1FO60840 AC095057.3-201ENST00000567102 1157 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.65□□□□□ -1.83
CACNA1FO60840 MIR5708-201ENST00000579723 85 ntBASIC3.65□□□□□ -1.83
CACNA1FO60840 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.65□□□□□ -1.83
CACNA1FO60840 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.65□□□□□ -1.83
CACNA1FO60840 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.65□□□□□ -1.83
CACNA1FO60840 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CACNA1FO60840 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1FO60840 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1FO60840 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1FO60840 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1FO60840 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1FO60840 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CACNA1FO60840 RNU6-532P-201ENST00000384318 107 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 MTCO1P21-201ENST00000416634 589 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AC019178.2-201ENST00000423595 505 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1FO60840 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1FO60840 RPS6P12-201ENST00000432491 726 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AC098826.1-201ENST00000433943 471 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1FO60840 AC108734.3-201ENST00000481241 1165 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AC021146.8-201ENST00000507455 733 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AC008565.1-201ENST00000509046 885 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 OR5H4P-201ENST00000510851 923 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1FO60840 AC107016.2-201ENST00000547968 190 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.64□□□□□ -1.83
CACNA1FO60840 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.64□□□□□ -1.83
CACNA1FO60840 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1FO60840 AC024595.1-201ENST00000623088 387 ntBASIC3.64□□□□□ -1.83
CACNA1FO60840 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.64□□□□□ -1.83
CACNA1FO60840 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1FO60840 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.64□□□□□ -1.83
CACNA1FO60840 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CACNA1FO60840 MIR1289-1-201ENST00000408836 144 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AC129850.1-201ENST00000436203 508 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 YWHAZP7-201ENST00000436906 631 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 MTCYBP42-201ENST00000444653 1130 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 SEPT14P24-201ENST00000447236 180 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC140076.1-201ENST00000449897 361 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.63□□□□□ -1.83
CACNA1FO60840 HSPE1P23-201ENST00000509838 286 ntBASIC3.63□□□□□ -1.83
CACNA1FO60840 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.63□□□□□ -1.83
CACNA1FO60840 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.63□□□□□ -1.83
CACNA1FO60840 AP002404.1-201ENST00000532005 451 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms