Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXA2O43364 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXA2O43364 MIR105-2-201ENST00000385083 81 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 AP000275.1-201ENST00000411943 390 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 RPS15AP6-201ENST00000420703 385 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 AC096920.1-201ENST00000423991 241 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 RPL30P3-201ENST00000424262 333 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXA2O43364 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXA2O43364 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXA2O43364 AC239809.1-201ENST00000450470 217 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXA2O43364 AL138752.1-201ENST00000452964 351 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 RN7SL72P-201ENST00000460697 269 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXA2O43364 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXA2O43364 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXA2O43364 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXA2O43364 AC074255.1-201ENST00000511259 501 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXA2O43364 SNORA31.6-201ENST00000516241 130 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 RNU6-911P-201ENST00000516523 104 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 AC109329.1-201ENST00000518744 317 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXA2O43364 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
HOXA2O43364 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXA2O43364 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXA2O43364 MIR4301-201ENST00000577203 66 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 MIR6130-201ENST00000619419 109 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXA2O43364 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXA2O43364 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
HOXA2O43364 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXA2O43364 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXA2O43364 AC092747.4-201ENST00000620519 1861 ntBASIC6.28□□□□□ -1.4
HOXA2O43364 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXA2O43364 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXA2O43364 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
HOXA2O43364 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXA2O43364 PHKBP1-201ENST00000450951 1951 ntBASIC6.27□□□□□ -1.4
HOXA2O43364 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA2O43364 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HOXA2O43364 MIR335-201ENST00000362173 94 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 Y_RNA.274-201ENST00000364714 101 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RNU6-178P-201ENST00000384631 104 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 ENSAP1-201ENST00000392855 326 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RNU2-14P-201ENST00000411053 191 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RPL21P38-201ENST00000418090 167 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RPL21P41-201ENST00000459863 264 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RN7SL570P-201ENST00000484405 292 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 AC009120.1-201ENST00000493458 473 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RPL7P23-201ENST00000493874 747 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RNA5SP228-201ENST00000516232 133 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RNU4-71P-201ENST00000516258 113 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 RNA5SP34-201ENST00000516887 130 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 AC021678.3-201ENST00000517893 476 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA2O43364 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.27□□□□□ -1.41
HOXA2O43364 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXA2O43364 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA2O43364 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA2O43364 OR1M4P-201ENST00000589199 287 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 MIR1244-1-201ENST00000612829 85 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 AC005344.1-201ENST00000613391 459 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 TEX41-280ENST00000629185 591 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXA2O43364 MIR1244-3-201ENST00000635744 85 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 MIR1244-2-201ENST00000636449 85 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 MIR1244-4-202ENST00000636813 85 ntBASIC6.27□□□□□ -1.41
HOXA2O43364 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA2O43364 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXA2O43364 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXA2O43364 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HOXA2O43364 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
HOXA2O43364 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA2O43364 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA2O43364 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA2O43364 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA2O43364 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HOXA2O43364 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA2O43364 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA2O43364 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HOXA2O43364 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXA2O43364 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA2O43364 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXA2O43364 RNY1-201ENST00000364228 113 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 Y_RNA.464-201ENST00000384282 110 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 RNU6-933P-201ENST00000384424 107 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 SNORD73A-201ENST00000386062 65 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 RNU6-1203P-201ENST00000410703 110 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 AC099677.1-201ENST00000420575 175 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 UBE2D3P2-201ENST00000424409 445 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms