Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 OR9M1P-201ENST00000459641 921 ntBASIC3.58□□□□□ -1.84
TO15178 AC026726.1-201ENST00000512859 601 ntBASIC3.58□□□□□ -1.84
TO15178 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TO15178 SNORA31.20-201ENST00000517111 133 ntBASIC3.58□□□□□ -1.84
TO15178 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TO15178 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.58□□□□□ -1.84
TO15178 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.58□□□□□ -1.84
TO15178 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.58□□□□□ -1.84
TO15178 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 PCMTD1P2-201ENST00000565017 355 ntBASIC3.58□□□□□ -1.84
TO15178 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 BNIP3P23-201ENST00000599655 511 ntBASIC3.58□□□□□ -1.84
TO15178 AC112187.2-201ENST00000604345 283 ntBASIC3.58□□□□□ -1.84
TO15178 AC004853.1-201ENST00000604902 698 ntBASIC3.58□□□□□ -1.84
TO15178 AL365503.1-201ENST00000605247 905 ntBASIC3.58□□□□□ -1.84
TO15178 AC097468.3-201ENST00000607956 456 ntBASIC3.58□□□□□ -1.84
TO15178 AC107214.2-201ENST00000608204 634 ntBASIC3.58□□□□□ -1.84
TO15178 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.58□□□□□ -1.84
TO15178 MIR7844-201ENST00000616161 122 ntBASIC3.58□□□□□ -1.84
TO15178 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TO15178 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.58□□□□□ -1.84
TO15178 AC073530.2-201ENST00000623987 261 ntBASIC3.58□□□□□ -1.84
TO15178 AC007494.3-201ENST00000624660 743 ntBASIC3.58□□□□□ -1.84
TO15178 AL049780.3-201ENST00000624612 1583 ntBASIC3.58□□□□□ -1.84
TO15178 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.58□□□□□ -1.84
TO15178 PRO1804-201ENST00000623780 2050 ntBASIC3.58□□□□□ -1.84
TO15178 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TO15178 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.57□□□□□ -1.84
TO15178 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
TO15178 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TO15178 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TO15178 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TO15178 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TO15178 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TO15178 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TO15178 AL672167.1-206ENST00000356293 943 ntBASIC3.57□□□□□ -1.84
TO15178 DEFB109C-201ENST00000382575 264 ntBASIC3.57□□□□□ -1.84
TO15178 DEFB109B-201ENST00000382656 264 ntBASIC3.57□□□□□ -1.84
TO15178 SNORD116-2-201ENST00000384274 95 ntBASIC3.57□□□□□ -1.84
TO15178 SNORD116-6-201ENST00000384711 96 ntBASIC3.57□□□□□ -1.84
TO15178 SNORA3.3-201ENST00000408712 125 ntBASIC3.57□□□□□ -1.84
TO15178 RNU6-712P-201ENST00000410558 100 ntBASIC3.57□□□□□ -1.84
TO15178 MTCO1P17-201ENST00000411522 491 ntBASIC3.57□□□□□ -1.84
TO15178 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.57□□□□□ -1.84
TO15178 AC092447.6-201ENST00000414578 210 ntBASIC3.57□□□□□ -1.84
TO15178 MTCO3P12-201ENST00000416718 547 ntBASIC3.57□□□□□ -1.84
TO15178 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.57□□□□□ -1.84
TO15178 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.57□□□□□ -1.84
TO15178 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.57□□□□□ -1.84
TO15178 SETP8-201ENST00000435341 628 ntBASIC3.57□□□□□ -1.84
TO15178 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.57□□□□□ -1.84
TO15178 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.57□□□□□ -1.84
TO15178 AC092754.2-201ENST00000463506 460 ntBASIC3.57□□□□□ -1.84
TO15178 AC091564.1-201ENST00000464563 479 ntBASIC3.57□□□□□ -1.84
TO15178 RPL30P9-201ENST00000465586 330 ntBASIC3.57□□□□□ -1.84
TO15178 MTND4P16-201ENST00000466108 1367 ntBASIC3.57□□□□□ -1.84
TO15178 MTND3P7-201ENST00000474435 343 ntBASIC3.57□□□□□ -1.84
TO15178 AP001025.2-201ENST00000490908 477 ntBASIC3.57□□□□□ -1.84
TO15178 AC021678.1-201ENST00000505195 936 ntBASIC3.57□□□□□ -1.84
TO15178 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.57□□□□□ -1.84
TO15178 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.57□□□□□ -1.84
TO15178 RNA5SP164-201ENST00000516533 110 ntBASIC3.57□□□□□ -1.84
TO15178 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.57□□□□□ -1.84
TO15178 AC106038.2-201ENST00000520706 568 ntBASIC3.57□□□□□ -1.84
TO15178 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TO15178 AP004247.1-201ENST00000531556 1289 ntBASIC3.57□□□□□ -1.84
TO15178 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.57□□□□□ -1.84
TO15178 CYCSP30-201ENST00000546447 172 ntBASIC3.57□□□□□ -1.84
TO15178 AL121603.1-201ENST00000553815 142 ntBASIC3.57□□□□□ -1.84
TO15178 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.57□□□□□ -1.84
TO15178 RN7SL703P-201ENST00000578485 302 ntBASIC3.57□□□□□ -1.84
TO15178 MIR3915-201ENST00000578518 97 ntBASIC3.57□□□□□ -1.84
TO15178 MIR5047-201ENST00000579212 100 ntBASIC3.57□□□□□ -1.84
TO15178 VN1R85P-201ENST00000601587 426 ntBASIC3.57□□□□□ -1.84
TO15178 AC015726.1-201ENST00000602353 681 ntBASIC3.57□□□□□ -1.84
TO15178 WISP1-OT1-201ENST00000602893 642 ntBASIC3.57□□□□□ -1.84
TO15178 AL731566.2-201ENST00000618971 317 ntBASIC3.57□□□□□ -1.84
TO15178 AC092447.10-201ENST00000620607 1652 ntBASIC3.57□□□□□ -1.84
TO15178 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.57□□□□□ -1.84
TO15178 AC092192.1-201ENST00000633154 1018 ntBASIC3.57□□□□□ -1.84
TO15178 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TO15178 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.56□□□□□ -1.84
TO15178 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TO15178 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
TO15178 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TO15178 CR383658.2-201ENST00000547576 1525 ntBASIC3.56□□□□□ -1.84
TO15178 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
TO15178 Y_RNA.234-201ENST00000364409 97 ntBASIC3.56□□□□□ -1.84
TO15178 RNU6-744P-201ENST00000365557 107 ntBASIC3.56□□□□□ -1.84
TO15178 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.56□□□□□ -1.84
TO15178 RNU6-1316P-201ENST00000384242 108 ntBASIC3.56□□□□□ -1.84
TO15178 SNORA57.1-201ENST00000391227 145 ntBASIC3.56□□□□□ -1.84
TO15178 AL356421.1-201ENST00000403255 413 ntBASIC3.56□□□□□ -1.84
TO15178 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.56□□□□□ -1.84
TO15178 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.56□□□□□ -1.84
TO15178 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.56□□□□□ -1.84
TO15178 RPL21P109-201ENST00000422213 475 ntBASIC3.56□□□□□ -1.84
TO15178 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms