Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RNU1-42P-201ENST00000364033 160 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 FAT1P1-201ENST00000406588 507 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.11□□□□□ -2.07
CACNA1AO00555 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.11□□□□□ -2.07
CACNA1AO00555 AC017007.3-201ENST00000479865 435 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
CACNA1AO00555 CCNHP1-201ENST00000513311 678 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 SNORA9.3-201ENST00000516383 129 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 AC092451.2-201ENST00000538746 658 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 AC008015.1-201ENST00000555505 465 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 HMGB1P50-201ENST00000605814 607 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 MIR98-201ENST00000606724 119 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 AL512598.1-201ENST00000610158 273 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 RMST_8.1-201ENST00000610287 165 ntBASIC2.11□□□□□ -2.07
CACNA1AO00555 DCAF13P1-201ENST00000495256 1330 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CACNA1AO00555 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CACNA1AO00555 RNU1-75P-201ENST00000347264 129 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.1□□□□□ -2.07
CACNA1AO00555 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.1□□□□□ -2.07
CACNA1AO00555 Y_RNA.549-201ENST00000384657 102 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 AL445646.1-201ENST00000431784 216 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 RPS7P2-201ENST00000435134 607 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 VN1R17P-201ENST00000472048 1090 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.1□□□□□ -2.07
CACNA1AO00555 MIR3683-201ENST00000580847 82 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 AC008507.1-201ENST00000587506 734 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 OR4G11P-202ENST00000642116 1414 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 RNU6-666P-201ENST00000363499 107 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 AL451074.5-201ENST00000415894 435 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 FAR1P1-201ENST00000427163 934 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 MTATP6P11-201ENST00000428071 670 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 BX322784.1-201ENST00000455793 1077 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
CACNA1AO00555 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CACNA1AO00555 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CACNA1AO00555 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.09□□□□□ -2.07
CACNA1AO00555 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CACNA1AO00555 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.09□□□□□ -2.07
CACNA1AO00555 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CACNA1AO00555 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
CACNA1AO00555 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CACNA1AO00555 AC244505.5-201ENST00000443639 207 ntBASIC2.09□□□□□ -2.07
CACNA1AO00555 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.09□□□□□ -2.07
CACNA1AO00555 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
CACNA1AO00555 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
CACNA1AO00555 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.09□□□□□ -2.08
CACNA1AO00555 AC098826.1-201ENST00000433943 471 ntBASIC2.09□□□□□ -2.08
CACNA1AO00555 AC009969.1-201ENST00000438726 172 ntBASIC2.09□□□□□ -2.08
CACNA1AO00555 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.09□□□□□ -2.08
CACNA1AO00555 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.09□□□□□ -2.08
CACNA1AO00555 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.09□□□□□ -2.08
CACNA1AO00555 Z99129.2-201ENST00000619967 314 ntBASIC2.09□□□□□ -2.08
CACNA1AO00555 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AC110491.1-201ENST00000562191 2010 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CACNA1AO00555 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CACNA1AO00555 RPL9P7-201ENST00000330965 580 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AC233279.1-201ENST00000455300 423 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 AC126182.1-201ENST00000478134 357 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AC016727.2-201ENST00000603988 621 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 MIR338-201ENST00000636369 67 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 DDX43P2-201ENST00000604753 1354 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 CDC27P3-201ENST00000635418 1910 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AL139156.1-201ENST00000412785 841 ntBASIC2.08□□□□□ -2.08
CACNA1AO00555 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.08□□□□□ -2.08
CACNA1AO00555 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.08□□□□□ -2.08
CACNA1AO00555 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.08□□□□□ -2.08
CACNA1AO00555 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CACNA1AO00555 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
CACNA1AO00555 AC097714.1-201ENST00000511272 1647 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.07□□□□□ -2.08
CACNA1AO00555 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 EBAG9P1-201ENST00000418955 543 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 CALM1P2-201ENST00000452941 448 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 AC103975.1-201ENST00000482506 483 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 AC022447.3-201ENST00000506865 495 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.07□□□□□ -2.08
CACNA1AO00555 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 AC068657.1-201ENST00000520807 306 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 FAM106DP-201ENST00000586416 501 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CACNA1AO00555 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CACNA1AO00555 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.07□□□□□ -2.08
CACNA1AO00555 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.07□□□□□ -2.08
CACNA1AO00555 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.07□□□□□ -2.08
CACNA1AO00555 AL354719.1-201ENST00000406535 843 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 EI24P1-201ENST00000416584 867 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 MTCO2P17-201ENST00000424336 677 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 CACYBPP1-201ENST00000438592 684 ntBASIC2.07□□□□□ -2.08
CACNA1AO00555 AL590399.6-201ENST00000446396 307 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms