Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC008264.2-201ENST00000610193 3731 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 SNRPFP2-201ENST00000440710 251 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 TRMT112P2-201ENST00000512910 132 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AC010265.1-201ENST00000513509 211 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 APOOP1-201ENST00000604695 592 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 AC010872.1-201ENST00000624225 675 ntBASIC1.91□□□□□ -2.1
COL6A6A6NMZ7 WWP1P1-201ENST00000466609 2769 ntBASIC1.9□□□□□ -2.1
COL6A6A6NMZ7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 MTCYBP29-201ENST00000436327 1006 ntBASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 SNRPFP4-201ENST00000456366 242 ntBASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 SNORA70.14-201ENST00000516205 110 ntBASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 AC067838.1-201ENST00000606064 577 ntBASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 MIR6733-201ENST00000635723 61 ntBASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL6A6A6NMZ7 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 XIAPP3-201ENST00000312918 795 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 RNU6-582P-201ENST00000362989 107 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 RNU6-819P-201ENST00000364116 107 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AL021407.1-201ENST00000404531 386 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC092427.1-202ENST00000430569 476 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 RN7SL297P-201ENST00000483161 293 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 RPL23AP63-201ENST00000498752 471 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 NAMPTP2-201ENST00000505629 1115 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC117532.1-201ENST00000514638 323 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AMZ2P1-203ENST00000565833 850 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 MTCO3P13-201ENST00000577757 781 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC006116.7-201ENST00000590141 756 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AL451074.6-201ENST00000608512 729 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC019131.2-201ENST00000609071 870 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC117490.2-201ENST00000610042 594 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 CU459211.1-201ENST00000635667 749 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC002546.1-201ENST00000588041 2504 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 RPS7P9-201ENST00000414704 586 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AIMP1P1-201ENST00000418670 937 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC012498.1-201ENST00000424037 437 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 IFNWP4-201ENST00000453148 294 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 MIR449C-201ENST00000516047 92 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC093331.1-201ENST00000521474 169 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 OR5D17P-201ENST00000531492 978 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC025260.1-201ENST00000548858 430 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AP001542.1-201ENST00000591314 200 ntBASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.89□□□□□ -2.11
COL6A6A6NMZ7 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 RNY1P14-201ENST00000384426 108 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC019129.1-201ENST00000403786 261 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 RPL5P19-201ENST00000404228 893 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 RNU2-68P-201ENST00000410878 191 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AL353093.1-201ENST00000441292 436 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC093392.2-201ENST00000450682 337 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AP000926.1-201ENST00000479573 241 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 RNA5SP76-201ENST00000516277 87 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 SNORD39.2-201ENST00000579995 76 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 MIR6779-201ENST00000617283 64 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 YWHAEP7-203ENST00000622054 312 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC106730.3-201ENST00000624568 641 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AC009452.1-201ENST00000640823 606 ntBASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
COL6A6A6NMZ7 AL139811.1-201ENST00000424779 2299 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms