Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 RNA5SP391-201ENST00000363456 119 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 RPL31P52-201ENST00000407532 367 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 RN7SKP111-201ENST00000410349 271 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AL031779.1-201ENST00000415663 330 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AL035407.1-201ENST00000429211 571 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 ANP32BP2-201ENST00000454525 545 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC023598.1-201ENST00000472521 361 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC011825.1-201ENST00000484967 388 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC096576.1-201ENST00000489014 359 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 RPL30P11-201ENST00000495304 339 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 MTND5P13-201ENST00000513046 1079 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AL117351.2-201ENST00000513571 157 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC005798.1-201ENST00000513715 387 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 OR5AP1P-201ENST00000529730 940 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC008083.4-201ENST00000615076 444 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AL607023.1-201ENST00000620045 248 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC103858.2-201ENST00000621471 543 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AC005858.4-201ENST00000623191 700 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 AF246928.1-201ENST00000623768 87 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 CR381670.1-201ENST00000624291 1693 ntBASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHAC2Q9Y5I4 DBF4P1-201ENST00000412976 1892 ntBASIC4.03□□□□□ -1.77
PCDHAC2Q9Y5I4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
PCDHAC2Q9Y5I4 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC107982.1-201ENST00000507171 1300 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 RNU6-283P-201ENST00000364788 107 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 U3.26-201ENST00000391236 204 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 RPS3AP26-201ENST00000398259 784 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 RPL5P18-201ENST00000406671 891 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 MIR1289-1-201ENST00000408836 144 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 RNA5SP239-201ENST00000410218 129 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC068533.2-201ENST00000411872 306 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 Z99755.1-201ENST00000414048 380 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 FCF1P2-201ENST00000415284 583 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 NPM1P11-201ENST00000417106 855 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC233981.1-201ENST00000423224 461 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AL138785.1-201ENST00000425821 331 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC244035.1-201ENST00000430042 390 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 YWHAZP8-201ENST00000436935 731 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC010683.1-201ENST00000473673 378 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 RPL30P6-201ENST00000475925 342 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 MTCO3P7-201ENST00000510008 774 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 LTV1P1-201ENST00000510683 1237 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 MTCO1P30-201ENST00000515244 580 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 RN7SKP83-201ENST00000516512 178 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC092851.1-201ENST00000535964 478 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC024909.2-201ENST00000553035 286 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC007424.1-203ENST00000554613 687 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 OR4K7P-201ENST00000580232 945 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 WISP1-OT1-201ENST00000602893 642 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AL590229.1-201ENST00000603497 542 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 AC091931.1-201ENST00000623488 728 ntBASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PCDHAC2Q9Y5I4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHAC2Q9Y5I4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms