Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC092954.2-201ENST00000609103 430 ntBASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 TUG1_2.1-201ENST00000614234 87 ntBASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA9Q9Y5G4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 CR848007.1-201ENST00000442354 1699 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 OR56B2P-202ENST00000641377 2453 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC139713.2-214ENST00000642059 1811 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 SNORA73.1-201ENST00000363107 205 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RNU6-173P-201ENST00000364215 104 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RNU6-1322P-201ENST00000364309 107 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RNA5SP235-201ENST00000365411 114 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 MIR708-201ENST00000390708 88 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RNU6-882P-201ENST00000391025 103 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 CALM2P3-201ENST00000400429 449 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 MIR1277-201ENST00000408536 78 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RN7SKP159-201ENST00000410657 292 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RNA5SP107-201ENST00000411358 122 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 UBE2FP1-201ENST00000416536 447 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC007283.2-201ENST00000424739 197 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL139415.2-201ENST00000431968 163 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC005094.1-201ENST00000440420 368 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL162389.1-201ENST00000449233 177 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RPL31P58-201ENST00000469001 379 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 S100A11P1-201ENST00000477525 312 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 VN1R104P-201ENST00000505115 1009 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RNU6-718P-201ENST00000516166 105 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 RNU1-6P-201ENST00000516290 144 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 Y_RNA.693-201ENST00000516641 110 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC005868.1-201ENST00000536421 331 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC103710.2-201ENST00000609912 942 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 SNHG22-203ENST00000617833 660 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AL356321.1-201ENST00000621360 228 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 AC139792.3-201ENST00000623525 224 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 SALL4P2-201ENST00000423288 2910 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA9Q9Y5G4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AL133243.3-201ENST00000617415 3004 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 RNU1-94P-201ENST00000362627 173 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 Y_RNA.453-201ENST00000384223 109 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 RPL7AP73-201ENST00000413490 353 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 RPL21P24-201ENST00000413752 448 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 MED13P1-201ENST00000428342 171 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 RPS4XP4-201ENST00000443195 763 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AC000111.2-201ENST00000448200 210 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 CYCSP34-201ENST00000458172 304 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 RPS17P2-201ENST00000461663 408 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 MTCO3P38-201ENST00000468910 766 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 MTAPP1-201ENST00000489154 819 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AC020890.1-201ENST00000491837 504 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 AC083829.1-201ENST00000503756 657 ntBASIC4.44□□□□□ -1.7
PCDHGA9Q9Y5G4 ARL4AP2-201ENST00000507378 601 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms