Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CKS1BP5-201ENST00000434172 273 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC093156.1-201ENST00000440382 670 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 MTND1P12-201ENST00000455231 147 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC013267.1-201ENST00000458227 267 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AL121769.1-201ENST00000469473 401 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 RPL35P6-201ENST00000490024 372 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 TMEM248P1-201ENST00000510579 951 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC015795.1-201ENST00000513669 327 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC090151.1-201ENST00000520784 730 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC107934.1-201ENST00000522215 217 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AP003034.1-201ENST00000534621 422 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 RPS3AP4-201ENST00000555161 764 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC106785.1-201ENST00000565935 262 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AL139286.1-201ENST00000604465 483 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AP005019.3-201ENST00000620418 560 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AL356321.1-201ENST00000621360 228 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC091905.1-201ENST00000624400 311 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 NMD3P1-201ENST00000439704 1488 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 AC139769.1-204ENST00000472297 1931 ntBASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHB1Q9Y5F3 NXPH1-205ENST00000602349 1953 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6-989P-201ENST00000362756 107 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 Y_RNA.88-201ENST00000363029 99 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6-181P-201ENST00000363225 107 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6-694P-201ENST00000364071 147 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RNU1-63P-201ENST00000383902 164 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6-114P-201ENST00000384704 105 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 SNORD115-47-201ENST00000391226 86 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RNU2-62P-201ENST00000410868 191 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC069157.1-201ENST00000421749 137 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC019097.1-201ENST00000424783 735 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RPS12P10-201ENST00000427031 377 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 MTND1P2-201ENST00000430604 821 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 MTCO2P11-201ENST00000431069 680 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC000111.3-201ENST00000433478 193 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RPL23AP93-201ENST00000440847 484 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 PPIAP3-201ENST00000450588 505 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 HMGB1P25-201ENST00000468402 607 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RPL31P58-201ENST00000469001 379 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RPS3AP14-201ENST00000483907 780 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC009646.1-201ENST00000510455 318 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 SNORA31.9-201ENST00000516429 84 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 RNU6-445P-201ENST00000516949 107 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 CYCSP29-201ENST00000533731 318 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 BNIP3P33-201ENST00000598912 569 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC012507.3-201ENST00000603556 477 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AL031176.1-201ENST00000604554 466 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 LARP7P1-201ENST00000605576 316 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AP002360.3-201ENST00000607673 710 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC092954.2-201ENST00000609103 430 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC023043.4-201ENST00000612081 449 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC007014.2-201ENST00000615581 479 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AL159972.1-201ENST00000625150 448 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AC019226.1-201ENST00000625666 515 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 LRRC77P-213ENST00000637727 880 ntBASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDHB1Q9Y5F3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms