Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 RNU6-359P-201ENST00000365466 108 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 MTND3P21-201ENST00000433774 331 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 HLA-N-201ENST00000437516 135 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 MTND1P1-201ENST00000445453 368 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 NANOGNBP1-201ENST00000448444 480 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 GAPDHP17-201ENST00000449858 1001 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 RN7SL98P-201ENST00000462271 300 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AP001025.2-201ENST00000490908 477 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 RN7SL812P-201ENST00000493791 279 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 MTCO2P4-201ENST00000517968 247 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 MIR3944-201ENST00000581277 108 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC010680.4-201ENST00000605334 543 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC098614.4-201ENST00000607601 462 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC091304.9-201ENST00000612091 226 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AL139089.1-201ENST00000620372 975 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 AC019278.1-201ENST00000623516 479 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 MIR492-201ENST00000638676 116 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 ZNF33CP-201ENST00000432492 2030 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS4AQ9UN37 PABPC1P7-201ENST00000413177 1513 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 ZNF734P-201ENST00000419494 1534 ntBASIC4.15□□□□□ -1.75
VPS4AQ9UN37 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 Y_RNA.46-201ENST00000362695 102 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 RNA5SP317-201ENST00000410176 116 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 RNA5SP311-201ENST00000411290 116 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC004987.3-201ENST00000413879 771 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC127526.1-201ENST00000417526 366 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 OR2B8P-201ENST00000432841 938 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AL356276.2-201ENST00000435919 558 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC114495.1-201ENST00000441274 436 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AL358232.1-201ENST00000448030 501 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC126182.1-201ENST00000478134 357 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 NDUFB4P2-201ENST00000509515 391 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 TMEM248P1-201ENST00000510579 951 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 HIGD1AP3-201ENST00000515857 278 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 RNA5SP315-201ENST00000516340 116 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 RNA5SP312-201ENST00000517068 116 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 RN7SKP234-201ENST00000517173 224 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 RNU1-45P-201ENST00000517191 141 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AP000827.1-201ENST00000527814 258 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 EEF1B2P4-201ENST00000551398 348 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC087481.2-201ENST00000565492 330 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 MIR3913-1-201ENST00000577744 102 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AL161729.4-201ENST00000604650 476 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AL022154.1-201ENST00000604698 785 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 AC103710.1-201ENST00000610003 901 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 MIR6075-201ENST00000620782 95 ntBASIC4.14□□□□□ -1.75
VPS4AQ9UN37 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS4AQ9UN37 FAM91A3P-201ENST00000456826 2544 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms