Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.21□□□□□ -1.58
FOXD3Q9UJU5 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 SSXP9-201ENST00000417503 292 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 GNG5P5-201ENST00000420444 220 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RPS11P1-201ENST00000451072 473 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RPS17P15-201ENST00000475609 349 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 AC022215.1-201ENST00000481770 362 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RN7SL283P-201ENST00000489055 303 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RNA5SP384-201ENST00000516615 116 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 IGLV2-28-201ENST00000520681 304 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 BDH2P1-201ENST00000602288 736 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 AC092447.9-201ENST00000603395 144 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RN7SL544P-201ENST00000617232 284 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RN7SL763P-201ENST00000620922 284 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 EOGT-210ENST00000615922 1931 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 PRO1804-201ENST00000623780 2050 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
FOXD3Q9UJU5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC073136.1-201ENST00000449426 2884 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 RN7SKP160-201ENST00000363804 340 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 RNU6-371P-201ENST00000364283 108 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 RNA5SP500-201ENST00000364486 119 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 RNA5SP132-201ENST00000364725 118 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 Y_RNA.389-201ENST00000383924 113 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AL391361.1-201ENST00000405580 489 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 RNU6-101P-201ENST00000410323 104 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC243428.1-201ENST00000421099 264 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC073063.1-201ENST00000434352 607 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 RPL12P18-201ENST00000437175 325 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AL163193.1-201ENST00000444895 788 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC092436.3-201ENST00000511788 257 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC027308.1-201ENST00000517993 110 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 NRBF2P4-201ENST00000520874 850 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 SUMO2P15-201ENST00000604285 278 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC104695.2-201ENST00000605056 775 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC002044.1-201ENST00000606707 158 ntBASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
FOXD3Q9UJU5 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
FOXD3Q9UJU5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FOXD3Q9UJU5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
FOXD3Q9UJU5 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms