Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RNA5SP267-201ENST00000364893 126 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 RNA5SP252-201ENST00000391131 119 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 UBA52P6-201ENST00000399822 382 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 AL139413.1-201ENST00000421309 217 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 RABEPKP1-201ENST00000440529 1026 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 CBWD4P-201ENST00000445695 655 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 HMGB1P15-201ENST00000453854 435 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 PPP1R2P5-201ENST00000457256 603 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 ACTR6P1-201ENST00000514311 1104 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 SDR42E1P2-201ENST00000614861 481 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 AC139769.3-201ENST00000618383 175 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 MIR7975-201ENST00000619350 68 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 U6.105-201ENST00000637379 88 ntBASIC1.61□□□□□ -2.15
SMCO4Q9NRQ5 MIR323B-201ENST00000385269 82 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 PTMAP2-201ENST00000397627 327 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 RPS20P15-201ENST00000412792 311 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 RPL35AP22-201ENST00000436855 335 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC018634.1-201ENST00000437554 401 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 ELOCP13-201ENST00000443934 329 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 MTCO3P44-201ENST00000510977 541 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC093014.1-201ENST00000548926 724 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AL136363.1-201ENST00000605349 337 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC007619.2-201ENST00000605743 379 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AL355816.1-201ENST00000607951 118 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 MIR378J-201ENST00000611988 109 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC020923.1-201ENST00000624021 917 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AL390862.1-201ENST00000635467 1469 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AC009487.4-201ENST00000624969 3585 ntBASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
SMCO4Q9NRQ5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 Z99496.1-201ENST00000469424 1477 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 RNA5SP374-201ENST00000362939 125 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 XGY1-201ENST00000381172 446 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 MIR183-201ENST00000384958 110 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL024507.1-201ENST00000412741 274 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL445687.1-201ENST00000439946 251 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 USP9YP8-201ENST00000441913 500 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL118520.1-201ENST00000450770 291 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AC093281.2-201ENST00000510153 597 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 RNA5SP341-201ENST00000516261 117 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 RNA5SP320-201ENST00000516263 124 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 RNA5SP200-201ENST00000516360 103 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 MTCYBP20-201ENST00000524239 1129 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 OR4V1P-201ENST00000525394 1140 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 TRAV28-201ENST00000557548 323 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 COX6CP3-201ENST00000580869 223 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 NRBF2P5-201ENST00000603087 788 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 SNORD14A-201ENST00000606526 91 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AC103810.6-201ENST00000606708 136 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AC025016.1-201ENST00000616746 682 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 AC110079.1-202ENST00000635213 138 ntBASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.59□□□□□ -2.15
SMCO4Q9NRQ5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.16
SMCO4Q9NRQ5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
SMCO4Q9NRQ5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 RNA5SP72-201ENST00000364442 117 ntBASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 MIR141-201ENST00000384975 95 ntBASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 MTND4LP21-201ENST00000415303 295 ntBASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 AL445685.2-201ENST00000422551 342 ntBASIC1.58□□□□□ -2.16
SMCO4Q9NRQ5 UBE2D3P2-201ENST00000424409 445 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms