Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSU72Q9NP77 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSU72Q9NP77 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 RNU6-1287P-201ENST00000362914 107 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RNA5SP90-201ENST00000364801 99 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RNU6-702P-201ENST00000364982 107 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 SET-203ENST00000372688 801 ntTSL 2 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 RNY1P14-201ENST00000384426 108 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 Y_RNA.496-201ENST00000384444 101 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RNU6-1060P-201ENST00000384664 107 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC004386.1-201ENST00000393214 761 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 AP000580.1-201ENST00000404439 358 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AL133388.1-201ENST00000404509 287 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RNU4-46P-201ENST00000410818 138 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 Y_RNA.618-201ENST00000410949 107 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RPL30P2-201ENST00000414021 291 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 GJA6P-201ENST00000415117 1042 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 BMS1P17-202ENST00000416720 316 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 CEACAMP1-201ENST00000434624 1035 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RPL7P28-201ENST00000437739 740 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 EEF1A1P1-201ENST00000447052 739 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RPS17P13-201ENST00000448974 407 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AL445665.1-202ENST00000452436 324 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC091180.1-201ENST00000462104 372 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC135721.1-201ENST00000497954 479 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 RNU6-189P-201ENST00000516120 101 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 SULT1C2P2-201ENST00000562517 294 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSU72Q9NP77 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC233702.9-201ENST00000581528 203 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 NF1P5-201ENST00000588287 448 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 CU639417.4-201ENST00000623928 207 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 AC091925.2-201ENST00000625059 256 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSU72Q9NP77 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.13□□□□□ -1.59
SSU72Q9NP77 SAGE4P-201ENST00000442271 3381 ntBASIC5.13□□□□□ -1.59
SSU72Q9NP77 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 MUC2-202ENST00000613187 4845 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 MIR133B-201ENST00000362210 119 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 Y_RNA.188-201ENST00000363952 111 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 MIR450B-201ENST00000401182 78 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 MIR1275-201ENST00000408770 80 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 PDSS1P1-201ENST00000422953 1114 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC116533.1-201ENST00000459748 321 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 RBBP4P6-201ENST00000508098 202 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 MRPS5P3-201ENST00000515577 166 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 RNU6-1092P-201ENST00000516955 87 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 RNA5SP373-201ENST00000517271 95 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AL049779.2-201ENST00000553847 315 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AL161670.1-201ENST00000554348 137 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AL049872.1-201ENST00000556323 322 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC107958.1-201ENST00000556576 290 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC008521.1-201ENST00000587471 187 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC009779.8-202ENST00000607990 932 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 SNORD91B-202ENST00000608459 222 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.12□□□□□ -1.59
SSU72Q9NP77 AC092608.2-201ENST00000624427 218 ntBASIC5.12□□□□□ -1.59
SSU72Q9NP77 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms