Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 TRAV15-201ENST00000556680 249 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC093519.1-201ENST00000566109 298 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC138915.2-201ENST00000569776 97 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 SEPT7P9-203ENST00000604116 343 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AL022154.1-201ENST00000604698 785 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC091167.4-201ENST00000605079 184 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC243654.2-201ENST00000612843 443 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AC026634.1-201ENST00000634369 198 ntBASIC4.13□□□□□ -1.75
EBF3Q9H4W6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
EBF3Q9H4W6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 OR4A15-201ENST00000314706 1035 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 RNU6-433P-201ENST00000363216 104 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 SNORA70.4-201ENST00000365509 134 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 SNORA3C-201ENST00000408792 125 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 RNA5SP44-201ENST00000410446 133 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 HMGN1P14-201ENST00000412459 517 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC234782.4-201ENST00000417646 1048 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 MTCYBP24-201ENST00000420387 1106 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC245054.1-201ENST00000420944 258 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 GLRXP1-201ENST00000423261 334 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AL365184.2-201ENST00000431139 435 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 MTCO1P48-201ENST00000448024 1096 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 RPL23AP35-201ENST00000451906 501 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 UBDP1-202ENST00000457888 382 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 PPIAP15-201ENST00000479662 484 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC023424.2-201ENST00000493479 777 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC105252.1-201ENST00000503089 286 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 RNU6-352P-201ENST00000516908 107 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC027309.2-201ENST00000520566 192 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AF279873.1-201ENST00000523393 313 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC091516.1-201ENST00000549191 703 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC005730.3-201ENST00000583067 366 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC020914.6-201ENST00000594327 272 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AL117336.2-201ENST00000602435 335 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 PSMA6P4-201ENST00000603247 718 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC008739.3-201ENST00000603262 127 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC091488.1-201ENST00000604239 660 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AL121757.2-201ENST00000611223 313 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC063943.3-201ENST00000615562 356 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC104260.1-201ENST00000616660 539 ntBASIC4.12□□□□□ -1.75
EBF3Q9H4W6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
EBF3Q9H4W6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC092326.2-201ENST00000624772 1561 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC134882.1-201ENST00000603738 1676 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 SNORA73.2-201ENST00000364946 201 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 CIR1P3-201ENST00000405137 479 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 MIR1284-201ENST00000408337 120 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 RN7SKP56-201ENST00000410513 331 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 SNORA57.3-201ENST00000411095 141 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 RNU6-603P-201ENST00000411403 107 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC009237.5-201ENST00000414271 501 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 FCF1P2-201ENST00000415284 583 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 MTCO3P1-205ENST00000422088 832 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 RPL12P46-201ENST00000436610 195 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AL356535.1-201ENST00000440335 398 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AL118496.2-201ENST00000448300 230 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 NF1P3-201ENST00000457709 450 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC013267.1-201ENST00000458227 267 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC091133.4-201ENST00000511142 308 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC022483.1-201ENST00000514020 567 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 AC093853.1-201ENST00000515689 483 ntBASIC4.11□□□□□ -1.75
EBF3Q9H4W6 RNY4P37-201ENST00000516225 96 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms