Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC008837.2-201ENST00000513076 418 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 OR5AK1P-201ENST00000524837 922 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC005832.3-201ENST00000537929 631 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC010198.2-201ENST00000550612 259 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL132657.2-201ENST00000564417 358 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL121772.2-201ENST00000614331 297 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AC025588.4-201ENST00000615802 908 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 AL445984.1-201ENST00000637834 659 ntBASIC3.37□□□□□ -1.87
DDX47Q9H0S4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DDX47Q9H0S4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 ZNF285B-201ENST00000561698 1767 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 SNORA46-201ENST00000384762 135 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 PTMAP2-201ENST00000397627 327 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 DHFRP6-201ENST00000401776 268 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AL591034.1-201ENST00000407447 340 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AL590084.1-201ENST00000407885 387 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 RNU4-65P-201ENST00000410473 140 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 RNA5SP80-201ENST00000410475 111 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 RNU2-47P-201ENST00000410649 186 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AL354692.1-201ENST00000423044 315 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC007742.1-201ENST00000425789 329 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC018644.1-201ENST00000429934 551 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AL590233.1-201ENST00000430017 456 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC073063.1-201ENST00000434352 607 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 ELOCP26-201ENST00000436067 329 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AP001992.1-205ENST00000462248 379 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC017015.1-201ENST00000477387 286 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC012181.1-201ENST00000479895 423 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 ACTR3P3-201ENST00000480448 893 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC090453.1-201ENST00000495560 436 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 APOOP4-201ENST00000513530 597 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 IGHV3-76-201ENST00000522465 295 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 SNORA51-201ENST00000606420 132 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC243773.3-201ENST00000613270 256 ntBASIC3.36□□□□□ -1.87
DDX47Q9H0S4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX47Q9H0S4 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AL136164.4-201ENST00000625013 2135 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 SNORA62.3-201ENST00000365110 153 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AL359837.1-201ENST00000381357 287 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 RN7SKP27-201ENST00000410684 333 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC245054.2-201ENST00000415639 319 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 MUPP-201ENST00000438111 566 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 RPS4XP10-201ENST00000465034 731 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC104164.3-201ENST00000467363 1258 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 MTCYBP17-201ENST00000503579 789 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 POU5F1P7-201ENST00000508759 541 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 HSPA8P13-201ENST00000523715 472 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 OR4H12P-201ENST00000556269 907 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AADACP1-206ENST00000561502 1193 ntBASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX47Q9H0S4 AL109653.1-201ENST00000603091 248 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms