Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL035411.2-201ENST00000604022 421 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC010738.1-201ENST00000604970 987 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC124312.4-201ENST00000605533 310 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AL049777.1-201ENST00000622740 518 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC040168.1-201ENST00000623594 991 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AP003476.1-201ENST00000623984 516 ntBASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.47□□□□□ -1.85
CCSER1Q9C0I3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.46□□□□□ -1.85
CCSER1Q9C0I3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
CCSER1Q9C0I3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC073325.2-201ENST00000339545 159 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 ANKRD36P1-201ENST00000344424 659 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 RNU6-1257P-201ENST00000384625 110 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AL355143.1-201ENST00000407101 841 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 RNU6-712P-201ENST00000410558 100 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 BOLA3P4-201ENST00000418151 400 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AL353678.1-201ENST00000422735 741 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC104308.1-201ENST00000454621 333 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC013828.1-201ENST00000481845 158 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 RN7SL20P-201ENST00000488827 297 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC093801.2-201ENST00000503966 1050 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC105914.1-201ENST00000511798 226 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 SNORA74D-201ENST00000516404 141 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 MTCO3P24-201ENST00000572729 782 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 MIR3200-201ENST00000580767 85 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC068620.3-201ENST00000602749 560 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AL109653.1-201ENST00000603091 248 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 RPL23AP92-201ENST00000603609 255 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AP002802.2-201ENST00000605877 235 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AL592148.2-201ENST00000612210 372 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AL390240.1-201ENST00000612950 384 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 AC099506.2-201ENST00000623074 221 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 CYP3A51P-201ENST00000633513 256 ntBASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
CCSER1Q9C0I3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 SUGT1P1-201ENST00000379514 476 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 RNU6-1300P-201ENST00000391046 108 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 RNU2-28P-201ENST00000410457 189 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 DUTP6-201ENST00000425573 462 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC092634.2-201ENST00000428146 1010 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 HSFY7P-201ENST00000432672 318 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 FTH1P1-201ENST00000437933 532 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 HSFY8P-201ENST00000437934 318 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 UQCRHP3-201ENST00000451503 251 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 HSFY5P-201ENST00000453726 309 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC244505.3-201ENST00000454598 187 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC026427.2-201ENST00000506228 536 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC010625.1-201ENST00000511296 403 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 SNORA48.10-201ENST00000516965 160 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AP001189.2-201ENST00000527320 189 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AP003066.2-201ENST00000529375 555 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC087481.2-201ENST00000565492 330 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC099785.1-201ENST00000605697 437 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC092954.1-201ENST00000609121 445 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC231759.1-201ENST00000616455 597 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AL391262.2-201ENST00000622466 494 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AL157770.1-201ENST00000623049 439 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 AL035425.3-201ENST00000564206 4996 ntBASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCSER1Q9C0I3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.44□□□□□ -1.86
CCSER1Q9C0I3 SNORD67-201ENST00000390833 111 ntBASIC3.44□□□□□ -1.86
CCSER1Q9C0I3 AC245054.2-201ENST00000415639 319 ntBASIC3.44□□□□□ -1.86
CCSER1Q9C0I3 RPL21P32-201ENST00000419877 477 ntBASIC3.44□□□□□ -1.86
CCSER1Q9C0I3 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.44□□□□□ -1.86
CCSER1Q9C0I3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.44□□□□□ -1.86
CCSER1Q9C0I3 RNF2P1-201ENST00000442955 1010 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms