Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 TOMM20P4-201ENST00000427861 435 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 UBE2D3P1-201ENST00000436669 444 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 Z99127.2-201ENST00000441426 334 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 IFNA11P-201ENST00000446352 526 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 RNU4-29P-201ENST00000515943 174 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 RNA5SP24-201ENST00000516478 95 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 AL049870.4-201ENST00000555741 486 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 AL049874.4-201ENST00000557593 255 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC060766.3-201ENST00000591442 263 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AL158827.2-201ENST00000602494 330 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AL160237.3-201ENST00000604114 1013 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC140725.3-201ENST00000616193 880 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 AC010338.1-201ENST00000621823 717 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 AL691447.3-201ENST00000635020 330 ntBASIC2.74□□□□□ -1.97
TRIM4Q9C037 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM4Q9C037 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM4Q9C037 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM4Q9C037 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 RNU6-670P-201ENST00000364312 104 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 RNU6-629P-201ENST00000384061 103 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 AL606490.7-201ENST00000433136 191 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 HMGB3P12-201ENST00000438745 556 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 RPS26P56-201ENST00000444468 240 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AL513328.1-201ENST00000446460 224 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AL445669.2-201ENST00000454425 421 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 RPS4XP6-201ENST00000477670 797 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC083906.5-201ENST00000503722 328 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC008565.1-201ENST00000509046 885 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC009163.5-201ENST00000575421 637 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC011890.2-201ENST00000613393 294 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AP004607.9-201ENST00000618202 316 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AC064859.1-201ENST00000624741 174 ntBASIC2.73□□□□□ -1.97
TRIM4Q9C037 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM4Q9C037 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRIM4Q9C037 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 DEFB109C-201ENST00000382575 264 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 DEFB109B-201ENST00000382656 264 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AL356057.1-202ENST00000402263 756 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 MTATP6P31-201ENST00000406985 692 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 RPS29P12-201ENST00000460178 152 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AP000926.3-201ENST00000497201 299 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 HMGB1P22-201ENST00000505315 124 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AC034159.1-201ENST00000513885 583 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AC016065.2-201ENST00000514530 444 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 RNA5SP82-201ENST00000516707 92 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 RNA5SP402-201ENST00000517148 110 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AC104115.2-201ENST00000523026 687 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AC010306.1-201ENST00000523223 1117 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 OR4R1P-201ENST00000529879 463 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AC109635.4-202ENST00000531666 412 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AP000916.1-201ENST00000533869 835 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 SNORD53-201ENST00000579969 78 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 MIR5194-201ENST00000582634 120 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.72□□□□□ -1.97
TRIM4Q9C037 MTCO1P9-201ENST00000505577 1534 ntBASIC2.72□□□□□ -1.97
TRIM4Q9C037 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM4Q9C037 MIR34A-201ENST00000385130 110 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM4Q9C037 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM4Q9C037 RPL23AP74-201ENST00000437246 471 ntBASIC2.71□□□□□ -1.98
TRIM4Q9C037 AC112653.1-201ENST00000443851 386 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms