Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AP005205.1-201ENST00000563503 508 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AL110115.1-201ENST00000614396 364 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 Z99129.2-201ENST00000619967 314 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC091931.1-201ENST00000623488 728 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC019226.1-201ENST00000625666 515 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 CCT4P2-201ENST00000233836 1548 ntBASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HERPUD2Q9BSE4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AP001148.1-201ENST00000624124 2359 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 SNORD35B-201ENST00000363660 87 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AL591034.1-201ENST00000407447 340 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 MIR1183-201ENST00000408856 89 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 RAC1P3-201ENST00000416129 580 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 Z99497.1-201ENST00000421282 135 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC233728.2-201ENST00000425348 757 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AL365184.2-201ENST00000431139 435 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 TBCAP1-201ENST00000436520 327 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 RPL26P6-201ENST00000440913 438 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 NUTF2P7-201ENST00000453086 375 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC106872.2-201ENST00000494303 480 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 RPS27AP13-201ENST00000498403 237 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 MTCO1P35-201ENST00000515270 228 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 ERHP1-201ENST00000523006 310 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 GTF2IP22-201ENST00000554443 182 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 HSPE1P5-201ENST00000561489 272 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 MIR3921-201ENST00000577308 85 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 COX6CP3-201ENST00000580869 223 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 UBE2L4-201ENST00000587688 464 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC025811.1-201ENST00000604312 472 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AL158801.5-201ENST00000623123 465 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC112204.3-201ENST00000623822 332 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC007494.3-201ENST00000624660 743 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC093591.3-201ENST00000634516 308 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 MIR492-201ENST00000638676 116 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AP001486.2-201ENST00000561652 5113 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC012321.1-201ENST00000561622 1588 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 AC007256.1-201ENST00000392253 2765 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 MTND5P33-201ENST00000571250 1450 ntBASIC4.18□□□□□ -1.74
HERPUD2Q9BSE4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AL445523.1-201ENST00000451184 1362 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 RNA5SP295-201ENST00000362655 121 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 RNU5E-8P-201ENST00000363502 116 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 RNU6-754P-201ENST00000391166 107 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 SKINT1L-201ENST00000401057 817 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AL022722.2-201ENST00000402519 180 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 RN7SKP33-201ENST00000410942 340 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 RPL36AP33-201ENST00000450395 310 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 CFTRP1-201ENST00000456646 183 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 AC078785.3-201ENST00000476607 425 ntBASIC4.17□□□□□ -1.74
HERPUD2Q9BSE4 BET1P1-201ENST00000482276 359 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms