Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 RNA5SP46-201ENST00000362370 120 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.167-201ENST00000363735 109 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 RNA5SP234-201ENST00000363916 119 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-754P-201ENST00000391166 107 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-954P-201ENST00000411355 107 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-516P-201ENST00000411381 104 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AL591848.1-201ENST00000413092 322 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 NUP35P1-201ENST00000422734 947 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 SRSF1P1-201ENST00000424058 520 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC005008.1-201ENST00000456151 612 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 RPS27AP1-201ENST00000475545 471 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 SNORD116-26-201ENST00000516006 96 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-256P-201ENST00000516747 97 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 HMGB1P19-201ENST00000517578 577 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC090136.1-201ENST00000520009 240 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC027369.5-201ENST00000533838 755 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 IGBP1P1-201ENST00000554337 1009 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AL049872.1-201ENST00000556323 322 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 OR7E18P-201ENST00000592589 702 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AL355598.1-201ENST00000604169 202 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AL589674.2-201ENST00000604304 337 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC010680.4-201ENST00000605334 543 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 Z82243.1-201ENST00000609432 473 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC006329.2-201ENST00000611491 394 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC011155.2-201ENST00000623202 216 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC025034.2-201ENST00000623264 286 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC132068.1-201ENST00000623805 459 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 CU639417.4-201ENST00000623928 207 ntBASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM56Q9BRZ2 AC073136.1-201ENST00000449426 2884 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-1252P-201ENST00000363054 104 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.148-201ENST00000363557 117 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 Y_RNA.158-201ENST00000363651 101 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-432P-201ENST00000384196 109 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 EIF4E2P1-201ENST00000393781 255 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AL139397.2-201ENST00000404529 772 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-985P-201ENST00000410182 104 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 RNU4-46P-201ENST00000410818 138 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 RNU6-387P-201ENST00000411331 105 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 RPS12P24-201ENST00000412619 387 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 VDAC1P9-201ENST00000412766 841 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 BX323014.1-201ENST00000412876 237 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 ELOCP18-201ENST00000434209 337 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 GSTM5P1-201ENST00000434751 660 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC005019.1-201ENST00000436455 431 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AL731563.1-201ENST00000442202 214 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AL035666.1-201ENST00000446195 348 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 TPT1P13-201ENST00000449760 499 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 DHFRP3-201ENST00000455595 559 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC011225.1-201ENST00000457751 369 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC023424.1-201ENST00000496058 459 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 RN7SL466P-201ENST00000497546 295 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC008638.1-201ENST00000506035 866 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 CCDC34P1-201ENST00000507441 517 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC100870.1-201ENST00000522035 505 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 MIR4489-201ENST00000578869 62 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 AC055839.1-201ENST00000634467 498 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 EIF2AP4-201ENST00000424793 1781 ntBASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.41□□□□□ -1.54
TRIM56Q9BRZ2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC010266.2-201ENST00000564741 3255 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 AC125336.1-201ENST00000508893 2827 ntBASIC5.4□□□□□ -1.54
TRIM56Q9BRZ2 ZNF33CP-201ENST00000432492 2030 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms