Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ELOCP13-201ENST00000443934 329 ntBASIC2.82□□□□□ -1.96
ABCA3Q99758 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCA3Q99758 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.82□□□□□ -1.96
ABCA3Q99758 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCA3Q99758 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.82□□□□□ -1.96
ABCA3Q99758 AC110588.1-201ENST00000559699 137 ntBASIC2.82□□□□□ -1.96
ABCA3Q99758 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.82□□□□□ -1.96
ABCA3Q99758 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.82□□□□□ -1.96
ABCA3Q99758 MIR6132-201ENST00000622083 109 ntBASIC2.82□□□□□ -1.96
ABCA3Q99758 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ABCA3Q99758 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.81□□□□□ -1.96
ABCA3Q99758 AL109809.4-201ENST00000603520 2185 ntBASIC2.81□□□□□ -1.96
ABCA3Q99758 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.81□□□□□ -1.96
ABCA3Q99758 SDCBPP3-201ENST00000419629 891 ntBASIC2.81□□□□□ -1.96
ABCA3Q99758 RPL23AP16-201ENST00000441715 421 ntBASIC2.81□□□□□ -1.96
ABCA3Q99758 TRBV26-201ENST00000456572 344 ntBASIC2.81□□□□□ -1.96
ABCA3Q99758 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.81□□□□□ -1.96
ABCA3Q99758 MFSD8-245ENST00000641743 948 ntBASIC2.81□□□□□ -1.96
ABCA3Q99758 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
ABCA3Q99758 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
ABCA3Q99758 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.8□□□□□ -1.96
ABCA3Q99758 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
ABCA3Q99758 RNU6-457P-201ENST00000363999 107 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 MIR142-201ENST00000384835 87 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 SNORA48.3-201ENST00000391081 134 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 AL445646.1-201ENST00000431784 216 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 UBE2V2P1-201ENST00000434717 398 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ABCA3Q99758 MTCYBP31-201ENST00000438855 1122 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 VN1R96P-201ENST00000446052 858 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 GSTA11P-201ENST00000452866 669 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.8□□□□□ -1.96
ABCA3Q99758 HMGB1P41-201ENST00000520234 440 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 YWHAEP7-203ENST00000622054 312 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ABCA3Q99758 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ABCA3Q99758 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ABCA3Q99758 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
ABCA3Q99758 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.8□□□□□ -1.96
ABCA3Q99758 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
ABCA3Q99758 MIR583-201ENST00000384846 75 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 MIR9-3-201ENST00000385084 90 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.79□□□□□ -1.96
ABCA3Q99758 AL118520.1-201ENST00000450770 291 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 HMGB3P21-201ENST00000452483 547 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCA3Q99758 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCA3Q99758 AC084757.1-201ENST00000559987 490 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 ISCA1P3-201ENST00000577104 373 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ABCA3Q99758 AC007256.1-201ENST00000392253 2765 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
ABCA3Q99758 AC010680.1-201ENST00000590024 3590 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCA3Q99758 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.79□□□□□ -1.96
ABCA3Q99758 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.79□□□□□ -1.96
ABCA3Q99758 RPL23AP44-201ENST00000482216 473 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.79□□□□□ -1.96
ABCA3Q99758 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.79□□□□□ -1.96
ABCA3Q99758 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.79□□□□□ -1.96
ABCA3Q99758 MTCO3P13-201ENST00000577757 781 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 AC002076.2-201ENST00000617362 122 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 AC091953.2-201ENST00000623979 160 ntBASIC2.79□□□□□ -1.96
ABCA3Q99758 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
ABCA3Q99758 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ABCA3Q99758 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ABCA3Q99758 MIR378A-201ENST00000362177 66 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 RNU1-138P-201ENST00000384093 164 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 RNA5SP270-201ENST00000411361 118 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 NDUFB4P6-201ENST00000436819 366 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 OR8X1P-201ENST00000534542 869 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.78□□□□□ -1.96
ABCA3Q99758 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.78□□□□□ -1.96
ABCA3Q99758 AC010200.2-201ENST00000605098 235 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 AC018754.1-201ENST00000607486 925 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 MIR4278-201ENST00000636094 69 ntBASIC2.78□□□□□ -1.96
ABCA3Q99758 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.78□□□□□ -1.96
ABCA3Q99758 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ABCA3Q99758 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.78□□□□□ -1.97
ABCA3Q99758 RN7SKP226-201ENST00000364912 300 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 U8.8-201ENST00000365399 135 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 RNA5SP167-201ENST00000365461 116 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
ABCA3Q99758 RN7SKP123-201ENST00000410732 291 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.77□□□□□ -1.97
ABCA3Q99758 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.77□□□□□ -1.97
ABCA3Q99758 AC068781.1-201ENST00000488231 618 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.77□□□□□ -1.97
ABCA3Q99758 OR4R2P-201ENST00000530815 597 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 AMZ2P1-203ENST00000565833 850 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 AL359821.1-201ENST00000605519 182 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
ABCA3Q99758 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
ABCA3Q99758 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.77□□□□□ -1.97
ABCA3Q99758 MTND4P35-201ENST00000604257 1375 ntBASIC2.77□□□□□ -1.97
ABCA3Q99758 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ABCA3Q99758 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
ABCA3Q99758 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms