Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 OR5D17P-201ENST00000531492 978 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.41□□□□□ -1.86
IFT140Q96RY7 MIR4255-201ENST00000579351 72 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 SNORA50A-202ENST00000629536 136 ntBASIC3.41□□□□□ -1.86
IFT140Q96RY7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
IFT140Q96RY7 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.4□□□□□ -1.87
IFT140Q96RY7 AC011155.1-201ENST00000316512 456 ntBASIC3.4□□□□□ -1.87
IFT140Q96RY7 CR769767.1-201ENST00000436337 346 ntBASIC3.4□□□□□ -1.87
IFT140Q96RY7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.4□□□□□ -1.87
IFT140Q96RY7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.4□□□□□ -1.87
IFT140Q96RY7 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
IFT140Q96RY7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.4□□□□□ -1.87
IFT140Q96RY7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.4□□□□□ -1.87
IFT140Q96RY7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.4□□□□□ -1.87
IFT140Q96RY7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
IFT140Q96RY7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
IFT140Q96RY7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.39□□□□□ -1.87
IFT140Q96RY7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.39□□□□□ -1.87
IFT140Q96RY7 AP003385.6-201ENST00000531603 374 ntBASIC3.39□□□□□ -1.87
IFT140Q96RY7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.39□□□□□ -1.87
IFT140Q96RY7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.39□□□□□ -1.87
IFT140Q96RY7 VN1R7P-201ENST00000619242 903 ntBASIC3.39□□□□□ -1.87
IFT140Q96RY7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
IFT140Q96RY7 MIR6733-201ENST00000635723 61 ntBASIC3.39□□□□□ -1.87
IFT140Q96RY7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
IFT140Q96RY7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
IFT140Q96RY7 SNORA40.18-201ENST00000391200 128 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.38□□□□□ -1.87
IFT140Q96RY7 AL358453.1-201ENST00000422522 250 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.38□□□□□ -1.87
IFT140Q96RY7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.38□□□□□ -1.87
IFT140Q96RY7 MTCO1P42-201ENST00000457379 726 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 AC140059.1-201ENST00000489238 361 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 AC026412.2-201ENST00000512270 1075 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 TRMT112P2-201ENST00000512910 132 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 RNA5SP385-201ENST00000515947 110 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 OR4R2P-201ENST00000530815 597 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.38□□□□□ -1.87
IFT140Q96RY7 Y_RNA.783-201ENST00000613546 102 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
IFT140Q96RY7 RPL23AP61-201ENST00000623642 466 ntBASIC3.38□□□□□ -1.87
IFT140Q96RY7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
IFT140Q96RY7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
IFT140Q96RY7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
IFT140Q96RY7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
IFT140Q96RY7 AC008173.1-201ENST00000418901 264 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 MUPP-201ENST00000438111 566 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 RPL23AP63-201ENST00000498752 471 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
IFT140Q96RY7 ELOCP31-201ENST00000540463 467 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 MIR4506-201ENST00000584693 77 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 LRRC77P-213ENST00000637727 880 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
IFT140Q96RY7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.37□□□□□ -1.87
IFT140Q96RY7 AL592437.2-201ENST00000421655 2434 ntBASIC3.37□□□□□ -1.87
IFT140Q96RY7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
IFT140Q96RY7 U8.8-201ENST00000365399 135 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 RN7SKP123-201ENST00000410732 291 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 AP000275.1-201ENST00000411943 390 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.36□□□□□ -1.87
IFT140Q96RY7 AL390023.1-201ENST00000428836 262 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.36□□□□□ -1.87
IFT140Q96RY7 SUB1P3-201ENST00000564581 315 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
IFT140Q96RY7 AC244517.12-201ENST00000623581 663 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 AC084035.1-201ENST00000634543 607 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
IFT140Q96RY7 AP001148.1-201ENST00000624124 2359 ntBASIC3.36□□□□□ -1.87
IFT140Q96RY7 MIR9-3-201ENST00000385084 90 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 AC005005.2-201ENST00000420779 380 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 AC003989.2-201ENST00000440224 169 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 AC092650.2-201ENST00000619984 902 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IFT140Q96RY7 BX005019.1-201ENST00000561881 1810 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IFT140Q96RY7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
IFT140Q96RY7 Y_RNA.122-201ENST00000363331 96 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 MIR7-2-201ENST00000384970 110 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.35□□□□□ -1.87
IFT140Q96RY7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 AC013562.2-201ENST00000611632 603 ntBASIC3.35□□□□□ -1.87
IFT140Q96RY7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
IFT140Q96RY7 AC000367.1-201ENST00000452711 1766 ntBASIC3.34□□□□□ -1.87
IFT140Q96RY7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
IFT140Q96RY7 FRG1BP-201ENST00000278882 761 ntBASIC3.34□□□□□ -1.88
IFT140Q96RY7 AL627390.1-201ENST00000396055 340 ntBASIC3.34□□□□□ -1.88
IFT140Q96RY7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms