Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 GXYLT1P1-201ENST00000446657 490 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 NDUFA5P7-201ENST00000452914 242 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RPS20P24-201ENST00000457473 361 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RNU7-140P-201ENST00000459546 60 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AP001486.1-201ENST00000463339 476 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RPL21P8-201ENST00000465083 535 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RPS26P21-201ENST00000475397 348 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RPS27AP1-201ENST00000475545 471 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC105914.1-201ENST00000511798 226 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 RN7SKP282-201ENST00000516824 299 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 SNORA31.26-201ENST00000517250 137 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AP000790.1-201ENST00000528891 737 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC018630.1-201ENST00000541376 925 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC098483.2-201ENST00000603158 454 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AP005229.2-201ENST00000609980 697 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 AL390240.1-201ENST00000612950 384 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL21A1Q96P44 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.82□□□□□ -1.96
COL21A1Q96P44 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL21A1Q96P44 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.82□□□□□ -1.96
COL21A1Q96P44 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL21A1Q96P44 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 RNU6-353P-201ENST00000364266 108 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 SNORA48.2-201ENST00000390926 124 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 MIR887-201ENST00000401258 79 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 SNORD88.1-201ENST00000408684 91 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AL024507.1-201ENST00000412741 274 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 RPL21P32-201ENST00000419877 477 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 SFR1P2-201ENST00000421841 730 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 SETP8-201ENST00000435341 628 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 RPL36AP33-201ENST00000450395 310 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 ARPC3P2-201ENST00000457786 533 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 snoU109.4-201ENST00000458953 143 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL21A1Q96P44 UBE2DNL-203ENST00000474922 222 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 GAPDHP39-201ENST00000481866 979 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 PSMA2P1-201ENST00000526365 646 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AP002404.1-201ENST00000532005 451 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC006518.2-201ENST00000542513 940 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 AL136520.1-202ENST00000555494 763 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 SULT1C2P1-202ENST00000562418 459 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC083760.1-201ENST00000589621 670 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 GAS5-AS1-201ENST00000602767 694 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC008759.3-201ENST00000613300 508 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AL512506.1-201ENST00000613918 449 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC018755.4-201ENST00000619715 454 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AC009318.4-201ENST00000620496 486 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AL590240.3-201ENST00000621416 943 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 AL360181.4-201ENST00000621752 134 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 BX649567.1-201ENST00000642071 1134 ntBASIC2.81□□□□□ -1.96
COL21A1Q96P44 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.81□□□□□ -1.96
COL21A1Q96P44 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
COL21A1Q96P44 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 GDI2P1-201ENST00000429312 1336 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC073325.2-201ENST00000339545 159 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 MIR422A-201ENST00000362286 90 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 SNORA71.1-201ENST00000364523 117 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 OR1L1-202ENST00000373686 1083 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 SAR1AP2-201ENST00000392696 594 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AL024474.1-201ENST00000404655 591 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 RN7SKP220-201ENST00000410611 288 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 VN1R51P-201ENST00000411675 945 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 TAF13P2-201ENST00000416876 286 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 DUTP6-201ENST00000425573 462 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 AL671855.1-201ENST00000446875 1203 ntBASIC2.8□□□□□ -1.96
COL21A1Q96P44 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.8□□□□□ -1.96
COL21A1Q96P44 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms