Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 RPL23AP31-201ENST00000456160 467 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 VN1R17P-201ENST00000472048 1090 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 LARP1BP2-201ENST00000486594 519 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 CEACAMP10-202ENST00000495431 496 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 FTH1P9-201ENST00000513251 355 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 RNA5SP309-201ENST00000516670 106 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 IGLVIV-65-201ENST00000517313 360 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 DEFB108D-201ENST00000527787 222 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC123904.2-201ENST00000548059 300 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 RPL21P5-201ENST00000554662 472 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 CYP4A43P-201ENST00000568156 121 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC009977.1-201ENST00000586015 570 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 SEPT7P9-203ENST00000604116 343 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AL451086.1-201ENST00000605596 223 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 RNU6-87P-201ENST00000607561 108 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC007038.2-201ENST00000608095 740 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC093838.1-201ENST00000613014 469 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC010678.1-201ENST00000614118 713 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 uc_338.13-201ENST00000618243 179 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC138Q96M89 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC138Q96M89 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC138Q96M89 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC138Q96M89 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC138Q96M89 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC009812.4-201ENST00000569134 1805 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 TEX21P-201ENST00000447107 1476 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC138Q96M89 DDX10P1-201ENST00000448545 1933 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 RNU1-15P-201ENST00000353977 144 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 Y_RNA.318-201ENST00000365131 97 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 Y_RNA.436-201ENST00000384097 102 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 SNORA11F-201ENST00000408237 128 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 RNU4-65P-201ENST00000410473 140 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 MIR1911-201ENST00000410783 80 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC138Q96M89 EIF1P3-201ENST00000423841 334 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 MARK2P15-201ENST00000432204 2186 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 RNU7-59P-201ENST00000459101 61 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 RPS26P15-201ENST00000488067 348 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC135721.1-201ENST00000497954 479 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 ARL2BPP4-201ENST00000506854 471 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 SNORA31.8-201ENST00000516327 108 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 PHBP17-201ENST00000528576 541 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AP000857.1-201ENST00000532151 543 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC005832.2-201ENST00000538921 1430 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 MIR4644-201ENST00000579929 84 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC020914.4-201ENST00000597690 277 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AP001330.4-201ENST00000604350 154 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC008250.2-201ENST00000615261 205 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AL021997.2-201ENST00000615674 271 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC233309.1-201ENST00000619522 751 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 AL139089.1-201ENST00000620372 975 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 MIR4275-201ENST00000636486 87 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC138Q96M89 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC138Q96M89 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC138Q96M89 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC138Q96M89 AC105074.1-201ENST00000623380 3095 ntBASIC4.25□□□□□ -1.73
CCDC138Q96M89 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC138Q96M89 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC138Q96M89 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC138Q96M89 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC138Q96M89 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
CCDC138Q96M89 RNU5E-8P-201ENST00000363502 116 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 RNA5SP175-201ENST00000364275 119 ntBASIC4.24□□□□□ -1.73
CCDC138Q96M89 JKAMPP1-201ENST00000413804 919 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms