Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU1-45P-201ENST00000517191 141 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 MTND2P7-201ENST00000521337 640 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AADACP1-206ENST00000561502 1193 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL512347.1-201ENST00000566420 503 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 MIR3609-201ENST00000582661 80 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL356863.1-201ENST00000623378 1080 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 OR6C71P-202ENST00000641886 1107 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL161912.2-201ENST00000565707 3007 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 AL022578.1-201ENST00000439330 1433 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 RNU5A-1-201ENST00000362698 116 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 RNU6-799P-201ENST00000363567 107 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 RNU6-76P-201ENST00000384060 104 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 AL139247.1-201ENST00000422768 325 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC234781.2-201ENST00000426370 994 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AL591419.1-201ENST00000427423 339 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 RPL23AP69-201ENST00000431134 458 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 NANOGP2-201ENST00000435391 727 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 SETD6P1-201ENST00000444575 317 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC098824.1-201ENST00000453565 980 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 PRELID3BP6-201ENST00000503839 571 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 RNU6-528P-201ENST00000516926 100 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC023632.4-201ENST00000517783 191 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC022695.1-201ENST00000522089 237 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC008489.1-201ENST00000524271 483 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 OR7E13P-201ENST00000526052 910 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 CASP1P1-201ENST00000526345 212 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 TRAV37-201ENST00000553906 342 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 ZNF415P1-201ENST00000582279 1166 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 GLUD1P4-201ENST00000590914 418 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AP001429.1-201ENST00000602568 530 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC079089.3-201ENST00000603094 673 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 MIR6130-201ENST00000619419 109 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 MIR7153-201ENST00000637758 57 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VMP1Q96GC9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.55□□□□□ -1.84
VMP1Q96GC9 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC012321.1-201ENST00000561622 1588 ntBASIC3.55□□□□□ -1.84
VMP1Q96GC9 AC093908.1-201ENST00000623125 8092 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 RNU6-952P-201ENST00000391164 108 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 ATG3P1-201ENST00000419507 911 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 AL035246.1-201ENST00000433554 1255 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 RPS27P29-201ENST00000463110 252 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 RPL31P50-201ENST00000471002 296 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 RN7SKP209-201ENST00000516888 304 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 SCARNA14-201ENST00000516903 136 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VMP1Q96GC9 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 OR7K1P-201ENST00000546439 926 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC034105.4-201ENST00000568304 277 ntBASIC3.54□□□□□ -1.84
VMP1Q96GC9 AC006557.5-201ENST00000603126 811 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms