Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AL161729.3-201ENST00000603533 673 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AL139286.1-201ENST00000604465 483 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 BX664608.1-201ENST00000610519 487 ntBASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4AQ8WYN0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC011155.1-201ENST00000316512 456 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RNA5SP258-201ENST00000362750 119 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RNU6-1207P-201ENST00000384343 107 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 MRPL42P2-201ENST00000403169 426 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 CCNG1P1-201ENST00000406783 885 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 MTND3P17-201ENST00000416968 344 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 MTCYBP24-201ENST00000420387 1106 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC009480.2-201ENST00000422916 432 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC133104.1-201ENST00000429100 218 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC073464.1-201ENST00000429823 534 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RPL31P35-201ENST00000431058 377 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC127537.2-201ENST00000439258 465 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RPL36AP13-201ENST00000457490 317 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC023598.1-201ENST00000472521 361 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RPS3AP14-201ENST00000483907 780 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 SNORD116-26-201ENST00000516006 96 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RNU7-143P-201ENST00000516781 65 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 RN7SKP277-201ENST00000516895 283 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 FAM92A1P1-201ENST00000528023 890 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC118273.2-201ENST00000532092 465 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AL845331.3-202ENST00000562856 261 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AP005205.1-201ENST00000563503 508 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC107954.1-201ENST00000565906 727 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 YWHAQP7-201ENST00000603536 658 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AL365503.1-201ENST00000605247 905 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC104458.1-201ENST00000608243 463 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AC009268.2-201ENST00000621925 457 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AP001486.2-201ENST00000561652 5113 ntBASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
ATG4AQ8WYN0 IQCB2P-201ENST00000401788 1633 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC024560.2-201ENST00000507981 1497 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AL450326.2-201ENST00000421913 1962 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC090971.4-201ENST00000560291 1800 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC139713.2-214ENST00000642059 1811 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 Y_RNA.1-201ENST00000352915 104 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 RNA5SP443-201ENST00000363083 132 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 RN7SKP224-201ENST00000364140 325 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 RNA5SP513-201ENST00000364648 118 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 RPL23AP32-201ENST00000395315 459 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AL732292.1-201ENST00000426692 226 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 FCF1P1-201ENST00000432690 571 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 RPL23AP46-201ENST00000438548 490 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC108734.1-201ENST00000439549 399 ntBASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.24□□□□□ -1.73
ATG4AQ8WYN0 FGF7P3-201ENST00000454645 303 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms