Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL645568.2-201ENST00000432815 1337 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RPL9P7-201ENST00000330965 580 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-50P-201ENST00000362356 103 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-989P-201ENST00000362756 107 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-707P-201ENST00000364647 95 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 U8.9-201ENST00000365667 134 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-1257P-201ENST00000384625 110 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 MIR649-201ENST00000384843 97 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 MIR181B1-201ENST00000385240 110 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RPL7P27-201ENST00000403775 720 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 MRPL50P2-201ENST00000416821 482 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 BOLA3P4-201ENST00000418151 400 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 Z93242.1-201ENST00000427102 353 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AL035410.1-201ENST00000427409 427 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 PTGES3P1-201ENST00000439531 483 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RNF2P1-201ENST00000442955 1010 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 NPM1P13-201ENST00000452663 865 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 snoU13.24-201ENST00000458998 104 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 RPL23AP11-201ENST00000475260 469 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 GAPDHP39-201ENST00000481866 979 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC008427.1-201ENST00000503102 655 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 DYNLL1P6-201ENST00000503440 264 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC008837.1-201ENST00000511513 412 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC104057.1-201ENST00000515547 497 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 OR5G4P-201ENST00000525251 760 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC019227.1-201ENST00000526902 510 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 NDUFS5P6-201ENST00000529136 295 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC034105.3-201ENST00000565294 442 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC074051.3-201ENST00000570238 358 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AL606834.3-201ENST00000602615 496 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC131902.3-201ENST00000611767 581 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AL109620.1-201ENST00000618738 1197 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AL049777.1-201ENST00000622740 518 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC026422.1-201ENST00000623961 452 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AP003476.1-201ENST00000623984 516 ntBASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RTN4IP1Q8WWV3 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AC073325.2-201ENST00000339545 159 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RNU6-115P-201ENST00000364310 107 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 Y_RNA.493-201ENST00000384422 102 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 SSXP10-201ENST00000402595 565 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AL133264.1-201ENST00000407157 562 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RNU4-78P-201ENST00000410940 126 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AC109780.2-201ENST00000413467 845 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AL449283.1-202ENST00000418249 604 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 KRR1P1-201ENST00000419430 803 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RAC1P8-201ENST00000427086 527 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RPL21P2-201ENST00000440049 481 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 MTATP6P14-201ENST00000455189 673 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AC010285.1-201ENST00000470580 392 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RPS29P2-201ENST00000479278 136 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RPS3AP43-201ENST00000479743 781 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AC084024.2-201ENST00000503480 791 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 AC010374.2-201ENST00000512933 535 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RNU1-61P-201ENST00000516107 151 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RN7SKP272-201ENST00000516988 232 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 RNA5SP135-201ENST00000517019 125 ntBASIC2.47□□□□□ -2.01
RTN4IP1Q8WWV3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms