Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MTND1P2-201ENST00000430604 821 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RPS26P40-201ENST00000435209 294 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 CBX1P4-201ENST00000439415 457 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RAB11AP1-201ENST00000442978 646 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC239367.2-201ENST00000447309 705 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 VN1R34P-201ENST00000447387 883 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RPL26P28-201ENST00000451325 435 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AL359385.1-201ENST00000456509 365 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AP000797.1-201ENST00000478870 387 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 ACTR3P3-201ENST00000480448 893 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 MTCYBP43-201ENST00000513621 740 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 IGKV2-36-201ENST00000519999 223 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC008562.1-201ENST00000521763 330 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 DEFB131D-201ENST00000526803 184 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 MIR548S-201ENST00000581352 82 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC067852.3-201ENST00000589177 561 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 AC039056.2-201ENST00000622261 511 ntBASIC3.82□□□□□ -1.8
LMO3Q8TAP4 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO3Q8TAP4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RLIMP2-201ENST00000427891 1563 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 Y_RNA.25-201ENST00000362528 102 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RNU6-462P-201ENST00000362659 105 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RNU6-1151P-201ENST00000384684 107 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 MIR506-201ENST00000384998 124 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AL590704.1-201ENST00000402856 794 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AL136116.1-201ENST00000403591 381 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 MTCYBP36-201ENST00000404146 440 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 BTF3P7-201ENST00000407097 488 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RNU6-248P-201ENST00000410720 107 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RNU6-272P-201ENST00000411028 104 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AL136133.1-201ENST00000413694 376 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC073136.2-201ENST00000417282 849 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC092634.6-201ENST00000418558 192 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RPL36AP36-201ENST00000418616 301 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AL389915.1-201ENST00000422463 466 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AL953862.1-201ENST00000423016 168 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 CYCSP4-201ENST00000429682 331 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC022022.1-201ENST00000430304 178 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 LARP1BP2-201ENST00000486594 519 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC005726.1-201ENST00000494679 427 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC105252.1-201ENST00000503089 286 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC026784.1-201ENST00000507986 352 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RNU6-583P-201ENST00000516012 92 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 IGLVIV-53-201ENST00000520107 367 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 BNIP3P5-201ENST00000562290 498 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC006130.2-201ENST00000586202 326 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 SEPT7P9-203ENST00000604116 343 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC011451.2-201ENST00000604303 598 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 AC027807.2-201ENST00000616099 408 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 OR5AK4P-201ENST00000635912 903 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 ZNF285B-201ENST00000561698 1767 ntBASIC3.81□□□□□ -1.8
LMO3Q8TAP4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.81□□□□□ -1.8
LMO3Q8TAP4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LMO3Q8TAP4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms