Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 IGKV2-26-201ENST00000518305 343 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AP001804.3-201ENST00000525146 880 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC024224.1-201ENST00000538284 609 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC245036.5-201ENST00000596330 847 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC009159.2-201ENST00000617603 606 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 Z99129.2-201ENST00000619967 314 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC011330.2-201ENST00000621680 635 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AL356585.4-201ENST00000623078 1229 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC090897.3-201ENST00000636973 1157 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 CDR1-202ENST00000625883 1485 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 SNORA71.3-201ENST00000362582 128 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 SNORD116-12-201ENST00000384468 92 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 MIR490-201ENST00000384865 128 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 RNU6-1242P-201ENST00000391052 103 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 SNORA11-201ENST00000408789 128 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC109780.2-201ENST00000413467 845 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AP000907.1-201ENST00000428428 510 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 MUPP-201ENST00000438111 566 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AL121871.1-201ENST00000443413 436 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 RPL26P28-201ENST00000451325 435 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 RPL12P26-201ENST00000452430 487 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 Z82190.1-201ENST00000454534 490 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 SUMO2P2-201ENST00000456482 255 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 RPS4XP2-201ENST00000458402 793 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC026410.2-201ENST00000460281 156 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 RPS15AP17-201ENST00000470598 390 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 RN7SL293P-201ENST00000481765 281 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC021146.5-201ENST00000503544 545 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 FCF1P8-201ENST00000510322 597 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 MRPS36P3-201ENST00000519284 130 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 MTCO2P15-201ENST00000532655 656 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC010198.2-201ENST00000550612 259 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 COX6CP3-201ENST00000580869 223 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 BDH2P1-201ENST00000602288 736 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC008739.3-201ENST00000603262 127 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AL357094.1-201ENST00000603845 844 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC107952.2-201ENST00000606048 486 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 LINC02211-204ENST00000642024 1070 ntBASIC3.51□□□□□ -1.85
RTL3Q8N8U3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL3Q8N8U3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 SNRPEP3-201ENST00000338402 276 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 RNA5SP50-201ENST00000363731 107 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 snoZ40.1-201ENST00000364540 72 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MIR670-201ENST00000390142 98 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 AC119751.3-201ENST00000399720 670 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MTND4P13-201ENST00000402078 1023 ntBASIC3.5□□□□□ -1.85
RTL3Q8N8U3 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.5□□□□□ -1.85
RTL3Q8N8U3 Z99755.1-201ENST00000414048 380 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms