Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RPL23AP57-201ENST00000332361 466 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MIR383-201ENST00000362257 73 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RNU1-18P-201ENST00000363062 164 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RNU6-1283P-201ENST00000365314 105 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 BTF3P7-201ENST00000407097 488 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RPS3AP3-201ENST00000411933 242 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 OR8G2P-201ENST00000412796 908 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 UBE2V1P8-201ENST00000437166 265 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RPL23AP74-201ENST00000437246 471 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MTATP6P23-201ENST00000440153 476 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RPL7P36-201ENST00000444633 681 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 BX322784.1-201ENST00000455793 1077 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RNU7-170P-201ENST00000459303 61 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RPS3AP17-201ENST00000472594 777 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 ACTR3P3-201ENST00000480448 893 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MTAPP1-201ENST00000489154 819 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RPL29P14-201ENST00000495837 428 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC021146.1-201ENST00000511202 716 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC022483.1-201ENST00000514020 567 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 RNU6-718P-201ENST00000516166 105 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 SNORA18.6-201ENST00000516792 115 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 OR5AP1P-201ENST00000529730 940 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 TOMM20P2-201ENST00000540082 421 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 CBX3P5-201ENST00000552017 521 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC006960.3-201ENST00000561845 705 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC006504.1-201ENST00000562493 3666 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MIR5684-201ENST00000585074 65 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MIR3138-201ENST00000585238 82 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL161729.4-201ENST00000604650 476 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC103710.1-201ENST00000610003 901 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AC090970.3-201ENST00000612566 866 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 FAM157B-203ENST00000639350 358 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 AL592437.2-201ENST00000421655 2434 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 ELL2P4-201ENST00000446870 1376 ntBASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP4Q8N3C7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 SAGE4P-201ENST00000442271 3381 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 MAPK10-372ENST00000641954 3413 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 RNU6-1226P-201ENST00000384317 107 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 Y_RNA.554-201ENST00000384672 102 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 ENSAP1-201ENST00000392855 326 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AL031679.1-201ENST00000400616 525 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 Y_RNA.608-201ENST00000410647 95 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC069218.2-201ENST00000411665 344 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 BX890604.2-201ENST00000427883 474 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC073614.1-201ENST00000438690 650 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 PGBD4P3-201ENST00000440731 581 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AC002381.1-201ENST00000447049 280 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 Z82190.1-201ENST00000454534 490 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 UQCRHP4-201ENST00000471686 272 ntBASIC3.73□□□□□ -1.81
CLIP4Q8N3C7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms