Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MTCO2P8-201ENST00000412213 658 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 C1DP1-201ENST00000426049 402 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 PTGES3P1-201ENST00000439531 483 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC002542.1-201ENST00000440683 193 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 RPS26P56-201ENST00000444468 240 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL009048.1-201ENST00000450437 298 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 RN7SL442P-201ENST00000473804 320 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 RN7SL20P-201ENST00000488827 297 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC006445.2-201ENST00000510061 472 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC007424.1-203ENST00000554613 687 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 MIR4509-3-201ENST00000578671 94 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 MIR4509-2-201ENST00000583920 94 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL020997.3-201ENST00000602843 359 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 MIR4509-1-201ENST00000618224 94 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 VN1R7P-201ENST00000619242 903 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 PLCE1P1-201ENST00000622094 305 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 MIR7843-201ENST00000622274 79 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC104985.3-201ENST00000623479 597 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC068620.4-201ENST00000636730 1182 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC138649.5-201ENST00000637456 137 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC093010.3-201ENST00000570269 15214 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 RNA5SP167-201ENST00000365461 116 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 OR1L1-202ENST00000373686 1083 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 RNU6-549P-201ENST00000384433 107 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 SNORA67.4-201ENST00000384688 142 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 RNU6-584P-201ENST00000410350 95 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC069218.2-201ENST00000411665 344 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL159169.1-201ENST00000421119 127 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AP000936.2-201ENST00000447151 681 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 HMGN2P21-201ENST00000447764 270 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 HMGN1P18-201ENST00000457642 277 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 NAP1L1P3-201ENST00000462291 880 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AP000893.1-201ENST00000474462 794 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 TMEM248P1-201ENST00000510579 951 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 USP9YP5-201ENST00000511770 630 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AP002770.2-201ENST00000543613 532 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL009028.1-201ENST00000604895 802 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC112220.2-201ENST00000605513 533 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 HSPE1P14-201ENST00000605812 302 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 HMGN2P28-201ENST00000606102 262 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AC004832.5-201ENST00000608677 401 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 AL157392.4-201ENST00000609756 345 ntBASIC3.95□□□□□ -1.78
NPHP3Q7Z494 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 RNU6-236P-201ENST00000363886 106 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 RNU6-805P-201ENST00000365643 106 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 RNA5SP107-201ENST00000411358 122 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 RPS7P9-201ENST00000414704 586 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC106883.1-201ENST00000418805 562 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC027644.1-201ENST00000419595 298 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 GTF2IP23-201ENST00000423746 351 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AL606517.1-201ENST00000446914 387 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC113420.1-201ENST00000507903 571 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 snoZ278.1-201ENST00000517059 112 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC022069.1-201ENST00000582910 658 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 MIR4769-201ENST00000584126 77 ntBASIC3.94□□□□□ -1.78
NPHP3Q7Z494 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
NPHP3Q7Z494 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.93□□□□□ -1.78
NPHP3Q7Z494 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
NPHP3Q7Z494 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms