Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 RN7SKP226-201ENST00000364912 300 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 MIR649-201ENST00000384843 97 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 SOD2P1-201ENST00000396543 562 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 DSTNP4-201ENST00000399472 474 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 MIR1305-201ENST00000408300 86 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 RNA5SP39-201ENST00000411245 120 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AL133384.1-201ENST00000412744 351 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC004552.1-201ENST00000419089 348 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 USP9YP12-201ENST00000450481 570 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 UBDP1-202ENST00000457888 382 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 snoU109.1-201ENST00000459339 135 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC034236.1-201ENST00000469891 373 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 RPS26P3-201ENST00000470205 348 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC090543.2-201ENST00000483963 348 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC004057.1-201ENST00000485827 348 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC106872.3-201ENST00000495104 446 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 UBE2CP3-201ENST00000502715 450 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC022447.3-201ENST00000506865 495 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC022878.1-201ENST00000530684 149 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC013828.2-201ENST00000532487 235 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 BNIP3P8-201ENST00000597863 560 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 BNIP3P23-201ENST00000599655 511 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC244505.7-201ENST00000599675 272 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AL049634.3-201ENST00000604968 457 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AL359535.1-201ENST00000612100 1087 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC090517.2-201ENST00000614966 680 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AC123768.4-201ENST00000616244 701 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 U6.42-201ENST00000618440 107 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 OR5AK4P-201ENST00000635912 903 ntBASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.79□□□□□ -1.64
UBE3BQ7Z3V4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC024560.2-201ENST00000507981 1497 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 RNU6-777P-201ENST00000364265 104 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 SNORA5A-201ENST00000384111 134 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 MIR200C-201ENST00000384980 68 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 ZNF603P-201ENST00000405613 487 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AL513174.1-201ENST00000423182 629 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 PGBD4P3-201ENST00000440731 581 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 RPL23AP16-201ENST00000441715 421 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AL353572.1-201ENST00000442490 417 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 RPS26P56-201ENST00000444468 240 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC026410.2-201ENST00000460281 156 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC018797.3-201ENST00000513388 1241 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 RNU1-95P-201ENST00000516357 160 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 RNU1-128P-201ENST00000516704 160 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC104986.1-201ENST00000517978 436 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 DEFB108A-201ENST00000530110 222 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 MIR544B-201ENST00000582372 78 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 BNIP3P33-201ENST00000598912 569 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC112191.3-201ENST00000604371 277 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 BCRP9-201ENST00000605312 388 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 AC079684.1-201ENST00000621405 437 ntBASIC4.78□□□□□ -1.64
UBE3BQ7Z3V4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms