Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 AC104118.1-201ENST00000607625 1589 ntBASIC5.89□□□□□ -1.47
USPL1Q5W0Q7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 SALL4P2-201ENST00000423288 2910 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 RNU6-249P-201ENST00000363016 102 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 Y_RNA.231-201ENST00000364358 102 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 SNORA32.2-201ENST00000384049 122 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 TMSB10P2-201ENST00000416049 131 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC018644.1-201ENST00000429934 551 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 HMGB1P18-201ENST00000438801 619 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC073415.1-201ENST00000449240 153 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 NANOGP10-201ENST00000453325 895 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC108059.3-201ENST00000456388 214 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 RNU6-329P-201ENST00000459618 107 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC007547.1-201ENST00000462177 490 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 RPL30P11-201ENST00000495304 339 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC091885.1-201ENST00000506658 268 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 GLUD1P4-201ENST00000590914 418 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC023043.4-201ENST00000612081 449 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 AC125336.1-201ENST00000508893 2827 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 ZFRP1-201ENST00000457579 2970 ntBASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
USPL1Q5W0Q7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC009229.4-201ENST00000623854 1947 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL731532.2-201ENST00000623542 1953 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RNA5SP391-201ENST00000363456 119 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RNU1-130P-201ENST00000363930 160 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RNU5A-8P-201ENST00000364102 114 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 Y_RNA.387-201ENST00000383918 102 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 Y_RNA.394-201ENST00000383942 103 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 MIR23B-201ENST00000384832 97 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RPL32P23-201ENST00000397237 405 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL645937.1-202ENST00000421799 937 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC092832.1-201ENST00000422934 400 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 DUTP6-201ENST00000425573 462 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 OR4F13P-201ENST00000428478 931 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 ERLEC1P1-201ENST00000433806 578 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 MTND1P9-201ENST00000453775 944 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL136126.1-201ENST00000473603 402 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC091167.1-201ENST00000492017 396 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 FTH1P24-201ENST00000503502 462 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC112206.3-201ENST00000514578 389 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RNU6-327P-201ENST00000516270 127 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RN7SKP256-201ENST00000517201 314 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 MRPL49P2-201ENST00000521066 465 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC025884.1-201ENST00000556034 378 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RNF138P2-201ENST00000603490 592 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL133215.3-201ENST00000609801 448 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 AL159972.1-201ENST00000625150 448 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 MTND4P27-201ENST00000450813 1354 ntBASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
USPL1Q5W0Q7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms