Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC023043.2-201ENST00000589678 1026 ntBASIC2.53□□□□□ -2
SCN7AQ01118 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN7AQ01118 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN7AQ01118 RNU6-1140P-201ENST00000410517 106 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 RNU6-321P-201ENST00000410912 106 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 CYCSP49-201ENST00000420810 319 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 RPL21P2-201ENST00000440049 481 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 AC087385.1-201ENST00000475062 312 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 RPS29P11-201ENST00000496507 171 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN7AQ01118 AC090695.1-201ENST00000561269 1222 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SCN7AQ01118 MIR8070-201ENST00000616510 88 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 XIST_intron.1-201ENST00000619444 68 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN7AQ01118 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.52□□□□□ -2.01
SCN7AQ01118 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN7AQ01118 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
SCN7AQ01118 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SCN7AQ01118 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCN7AQ01118 RNA5SP213-201ENST00000391031 106 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 SDR42E1P3-201ENST00000438345 502 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN7AQ01118 RPS27P5-201ENST00000444247 244 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AL445669.2-201ENST00000454425 421 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 RNA5SP309-201ENST00000516670 106 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN7AQ01118 AL356575.1-201ENST00000603008 283 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 snoU13.31-201ENST00000607291 104 ntBASIC2.51□□□□□ -2.01
SCN7AQ01118 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SCN7AQ01118 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCN7AQ01118 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCN7AQ01118 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCN7AQ01118 RNU6-1263P-201ENST00000384601 106 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 Z82205.1-201ENST00000428456 297 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.5□□□□□ -2.01
SCN7AQ01118 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AC087241.2-201ENST00000535801 324 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AC108479.2-201ENST00000617314 601 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 FAM35CP-201ENST00000554755 2470 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 AP005901.5-201ENST00000545779 1796 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SCN7AQ01118 AF274854.1-201ENST00000413236 615 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.5□□□□□ -2.01
SCN7AQ01118 MTCYBP14-201ENST00000457471 715 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 RPL36AP21-201ENST00000490372 323 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 GTF2IP9-201ENST00000502460 301 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SCN7AQ01118 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AP000889.2-201ENST00000532684 490 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.5□□□□□ -2.01
SCN7AQ01118 AC048347.1-201ENST00000624621 427 ntBASIC2.5□□□□□ -2.01
SCN7AQ01118 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCN7AQ01118 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCN7AQ01118 MTND4P13-201ENST00000402078 1023 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 AL445685.2-201ENST00000422551 342 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 ATP5F1P1-201ENST00000433775 569 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 RPL34P26-201ENST00000445636 354 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN7AQ01118 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN7AQ01118 AC087190.1-201ENST00000484462 480 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN7AQ01118 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN7AQ01118 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN7AQ01118 AC128687.1-201ENST00000605304 619 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 AP003117.2-201ENST00000606010 545 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 AL159169.2-201ENST00000610061 1269 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 AC092650.2-201ENST00000619984 902 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN7AQ01118 SNORA50A-202ENST00000629536 136 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 AC244517.1-201ENST00000606030 2086 ntBASIC2.49□□□□□ -2.01
SCN7AQ01118 NR1H5P-201ENST00000452683 1377 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 AL355578.1-201ENST00000607405 1328 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN7AQ01118 U3.37-201ENST00000408528 213 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 AC099336.2-201ENST00000422457 254 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN7AQ01118 AC108667.1-201ENST00000428618 249 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN7AQ01118 UBE2V2P4-201ENST00000447495 259 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN7AQ01118 OR52A4P-203ENST00000498233 1014 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SCN7AQ01118 MIR4255-201ENST00000579351 72 ntBASIC2.48□□□□□ -2.01
SCN7AQ01118 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms