Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC005336.3-201ENST00000623833 2679 ntBASIC2.04□□□□□ -2.08
CCL20P78556 AC098679.5-201ENST00000624394 571 ntBASIC2.04□□□□□ -2.08
CCL20P78556 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.04□□□□□ -2.08
CCL20P78556 AC130650.2-201ENST00000618736 2403 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC026241.1-201ENST00000517873 2142 ntBASIC2.03□□□□□ -2.08
CCL20P78556 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCL20P78556 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCL20P78556 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCL20P78556 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCL20P78556 AC025263.3-201ENST00000622965 1396 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AL513185.3-201ENST00000433335 1300 ntBASIC2.03□□□□□ -2.08
CCL20P78556 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCL20P78556 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCL20P78556 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CCL20P78556 SNORA57.1-201ENST00000391227 145 ntBASIC2.03□□□□□ -2.08
CCL20P78556 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.03□□□□□ -2.08
CCL20P78556 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL20P78556 AC092447.6-201ENST00000414578 210 ntBASIC2.03□□□□□ -2.08
CCL20P78556 RPLP0P7-201ENST00000416050 667 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC011816.1-201ENST00000441346 546 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AL133547.1-201ENST00000448546 220 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL20P78556 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.03□□□□□ -2.08
CCL20P78556 BTF3P5-201ENST00000457252 467 ntBASIC2.03□□□□□ -2.08
CCL20P78556 RPS4XP10-201ENST00000465034 731 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC083906.5-201ENST00000503722 328 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC006445.2-201ENST00000510061 472 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL20P78556 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.03□□□□□ -2.08
CCL20P78556 OR4P1P-201ENST00000530808 1136 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC136624.4-201ENST00000573044 370 ntBASIC2.03□□□□□ -2.08
CCL20P78556 MIR5680-201ENST00000577577 84 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.03□□□□□ -2.08
CCL20P78556 VN1R88P-201ENST00000596787 292 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AF230666.2-201ENST00000602328 725 ntBASIC2.03□□□□□ -2.08
CCL20P78556 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.03□□□□□ -2.08
CCL20P78556 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.03□□□□□ -2.08
CCL20P78556 AC110079.1-202ENST00000635213 138 ntBASIC2.03□□□□□ -2.08
CCL20P78556 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CCL20P78556 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCL20P78556 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCL20P78556 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCL20P78556 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL20P78556 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCL20P78556 RNU1-51P-201ENST00000365345 176 ntBASIC2.02□□□□□ -2.09
CCL20P78556 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCL20P78556 RN7SKP263-201ENST00000411194 309 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL20P78556 AL356320.2-201ENST00000417263 507 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AL807761.1-201ENST00000417622 171 ntBASIC2.02□□□□□ -2.09
CCL20P78556 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCL20P78556 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL20P78556 MTND4P24-201ENST00000424002 397 ntBASIC2.02□□□□□ -2.09
CCL20P78556 MTCO1P39-201ENST00000426148 480 ntBASIC2.02□□□□□ -2.09
CCL20P78556 C4BPAP2-201ENST00000428434 478 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AC004975.1-201ENST00000428733 208 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AC097713.2-201ENST00000430199 356 ntBASIC2.02□□□□□ -2.09
CCL20P78556 EZH2P1-201ENST00000431167 291 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AC091286.1-201ENST00000431233 461 ntBASIC2.02□□□□□ -2.09
CCL20P78556 TPTE2P1-204ENST00000435256 593 ntBASIC2.02□□□□□ -2.09
CCL20P78556 LSM1P1-201ENST00000438629 273 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL20P78556 AC010099.1-201ENST00000455434 375 ntBASIC2.02□□□□□ -2.09
CCL20P78556 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL20P78556 VPS26AP1-201ENST00000483197 979 ntBASIC2.02□□□□□ -2.09
CCL20P78556 VN1R104P-201ENST00000505115 1009 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL20P78556 MTND3P24-201ENST00000506306 329 ntBASIC2.02□□□□□ -2.09
CCL20P78556 RNA5SP282-201ENST00000516355 108 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.02□□□□□ -2.09
CCL20P78556 AC087272.1-201ENST00000523624 533 ntBASIC2.02□□□□□ -2.09
CCL20P78556 PSMA2P1-201ENST00000526365 646 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCL20P78556 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.02□□□□□ -2.09
CCL20P78556 RPL23AP92-201ENST00000603609 255 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AC055876.5-201ENST00000605667 259 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AL355802.4-201ENST00000607635 548 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AL161734.1-201ENST00000609720 557 ntBASIC2.02□□□□□ -2.09
CCL20P78556 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AC073569.3-201ENST00000619055 682 ntBASIC2.02□□□□□ -2.09
CCL20P78556 AL161637.1-201ENST00000622380 412 ntBASIC2.02□□□□□ -2.09
CCL20P78556 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.02□□□□□ -2.09
CCL20P78556 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.02□□□□□ -2.09
CCL20P78556 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
CCL20P78556 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CCL20P78556 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CCL20P78556 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL20P78556 AP000526.1-201ENST00000603308 1388 ntBASIC2.01□□□□□ -2.09
CCL20P78556 AC007342.9-201ENST00000623877 1385 ntBASIC2.01□□□□□ -2.09
CCL20P78556 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL20P78556 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.01□□□□□ -2.09
CCL20P78556 RPL21P132-201ENST00000331267 462 ntBASIC2.01□□□□□ -2.09
CCL20P78556 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCL20P78556 NACA3P-201ENST00000359690 648 ntBASIC2.01□□□□□ -2.09
CCL20P78556 RNU6-173P-201ENST00000364215 104 ntBASIC2.01□□□□□ -2.09
CCL20P78556 SNORD82-201ENST00000365530 70 ntBASIC2.01□□□□□ -2.09
CCL20P78556 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCL20P78556 AL162578.1-201ENST00000406202 378 ntBASIC2.01□□□□□ -2.09
CCL20P78556 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms