Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 RPL23AP70-201ENST00000483361 460 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AC093663.2-201ENST00000484625 313 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AC023424.2-201ENST00000493479 777 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
FOXA3P55318 VN1R104P-201ENST00000505115 1009 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 HMGB3P3-201ENST00000510526 400 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AC016550.3-201ENST00000515706 767 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA3P55318 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA3P55318 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.89□□□□□ -2.11
FOXA3P55318 AC090616.3-201ENST00000582184 217 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AL645944.1-201ENST00000603857 493 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 DPRXP5-201ENST00000604662 539 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AL136363.1-201ENST00000605349 337 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 MIR6895-201ENST00000613497 78 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AL731566.2-201ENST00000618971 317 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AC034229.5-201ENST00000624258 185 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
FOXA3P55318 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
FOXA3P55318 AC012321.1-201ENST00000561622 1588 ntBASIC1.89□□□□□ -2.11
FOXA3P55318 AP000526.1-201ENST00000603308 1388 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.88□□□□□ -2.11
FOXA3P55318 AL512646.1-201ENST00000269395 1077 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 RNA5SP267-201ENST00000364893 126 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
FOXA3P55318 MIR449B-201ENST00000384995 97 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 AL356057.3-201ENST00000402607 340 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA3P55318 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
FOXA3P55318 YWHAZP8-201ENST00000436935 731 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA3P55318 AL513328.1-201ENST00000446460 224 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 HMGN1P8-201ENST00000463578 288 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 RN7SL807P-201ENST00000470923 297 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
FOXA3P55318 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA3P55318 AC025459.1-201ENST00000504072 156 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.88□□□□□ -2.11
FOXA3P55318 AC113155.1-201ENST00000511141 769 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA3P55318 IGLV3-17-201ENST00000519099 244 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 SNRPGP16-201ENST00000533275 226 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 AC121758.2-201ENST00000553271 193 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA3P55318 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.88□□□□□ -2.11
FOXA3P55318 AC090666.1-201ENST00000578241 445 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 MIR3158-1-201ENST00000583596 81 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 AC005229.3-201ENST00000603438 323 ntBASIC1.88□□□□□ -2.11
FOXA3P55318 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
FOXA3P55318 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
FOXA3P55318 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
FOXA3P55318 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.88□□□□□ -2.11
FOXA3P55318 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
FOXA3P55318 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
FOXA3P55318 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
FOXA3P55318 RNA5SP374-201ENST00000362939 125 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 RNU5D-1-201ENST00000363299 116 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 SNORA9-201ENST00000384215 133 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 SNORA41-201ENST00000384675 132 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 MIR9-1-201ENST00000385198 89 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 MIR524-201ENST00000385242 87 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
FOXA3P55318 MIR1303-201ENST00000408625 86 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.87□□□□□ -2.11
FOXA3P55318 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA3P55318 AL158156.1-201ENST00000422509 473 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 MTCO2P17-201ENST00000424336 677 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AC114973.1-201ENST00000429057 632 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AL050321.1-201ENST00000432363 400 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 ARL4AP4-201ENST00000434170 518 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.87□□□□□ -2.11
FOXA3P55318 VN1R34P-201ENST00000447387 883 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA3P55318 FAM133DP-201ENST00000464802 691 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.87□□□□□ -2.11
FOXA3P55318 AC096751.1-202ENST00000502691 1067 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA3P55318 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA3P55318 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA3P55318 OR5BM1P-201ENST00000512021 366 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.87□□□□□ -2.11
FOXA3P55318 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.87□□□□□ -2.11
FOXA3P55318 AC010306.1-201ENST00000523223 1117 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AP000867.2-201ENST00000532468 320 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AC139103.1-201ENST00000534696 1030 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA3P55318 AC007115.1-201ENST00000546853 234 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.87□□□□□ -2.11
FOXA3P55318 AC008669.1-201ENST00000565823 2178 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.87□□□□□ -2.11
FOXA3P55318 AP001330.4-201ENST00000604350 154 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AL109618.2-201ENST00000605527 211 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 AC006133.1-201ENST00000617106 264 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 MIR203B-201ENST00000636080 86 ntBASIC1.87□□□□□ -2.11
FOXA3P55318 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.87□□□□□ -2.11
FOXA3P55318 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
FOXA3P55318 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms