Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC009237.2-201ENST00000421358 284 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCS2P54868 AL365396.1-201ENST00000430854 671 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC087499.2-201ENST00000432861 149 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.41□□□□□ -1.86
HMGCS2P54868 Z77249.1-201ENST00000444622 1175 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 OFD1P3Y-201ENST00000453312 783 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC092155.2-201ENST00000454675 477 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 PTGES3P5-201ENST00000455109 434 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL136097.1-201ENST00000456945 913 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC108078.3-201ENST00000502633 489 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC011352.3-201ENST00000505162 593 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCS2P54868 IGKV2D-23-201ENST00000518179 286 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.41□□□□□ -1.86
HMGCS2P54868 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCS2P54868 AC079600.2-201ENST00000550076 130 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.41□□□□□ -1.86
HMGCS2P54868 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.41□□□□□ -1.86
HMGCS2P54868 MIR5708-201ENST00000579723 85 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC010928.3-201ENST00000587712 541 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 VN1R83P-201ENST00000595685 445 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL035413.2-201ENST00000604801 525 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
HMGCS2P54868 U73479.1-201ENST00000618062 168 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC109454.4-201ENST00000623411 649 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AC068787.1-201ENST00000623908 691 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 MIR4278-201ENST00000636094 69 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 LINC02211-204ENST00000642024 1070 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS2P54868 AL157700.1-201ENST00000561973 1432 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 AL021368.2-201ENST00000606125 5352 ntBASIC3.41□□□□□ -1.86
HMGCS2P54868 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS2P54868 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HMGCS2P54868 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
HMGCS2P54868 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMGCS2P54868 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
HMGCS2P54868 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HMGCS2P54868 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
HMGCS2P54868 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.4□□□□□ -1.86
HMGCS2P54868 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
HMGCS2P54868 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
HMGCS2P54868 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCS2P54868 RPL7P26-201ENST00000333817 754 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 snoZ40.1-201ENST00000364540 72 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 SNORD6-201ENST00000365444 73 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 EI24P1-201ENST00000416584 867 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 Z75741.2-201ENST00000417272 1167 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AL513175.2-201ENST00000422071 443 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 Z93242.1-201ENST00000427102 353 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 RPS20P5-201ENST00000434808 360 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 YWHAZP8-201ENST00000436935 731 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.4□□□□□ -1.87
HMGCS2P54868 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGCS2P54868 RPL23AP15-201ENST00000450202 459 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 SLC31A1P1-201ENST00000451221 567 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 CEACAMP4-201ENST00000457676 421 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCS2P54868 TMEM248P1-201ENST00000510579 951 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC021146.1-201ENST00000511202 716 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC109471.1-201ENST00000511631 612 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 RNU6-202P-201ENST00000515998 96 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGCS2P54868 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC090616.5-202ENST00000582111 297 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 AC024153.1-201ENST00000603103 365 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC007566.2-201ENST00000603642 413 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC007619.2-201ENST00000605743 379 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AL157770.1-201ENST00000623049 439 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 OR1S1-201ENST00000624470 978 ntBASIC3.4□□□□□ -1.87
HMGCS2P54868 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCS2P54868 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCS2P54868 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCS2P54868 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.4□□□□□ -1.87
HMGCS2P54868 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HMGCS2P54868 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS2P54868 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS2P54868 RNU4-68P-201ENST00000364314 141 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.39□□□□□ -1.87
HMGCS2P54868 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
HMGCS2P54868 AL031679.1-201ENST00000400616 525 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 RHEBP3-201ENST00000411920 351 ntBASIC3.39□□□□□ -1.87
HMGCS2P54868 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS2P54868 DUTP6-201ENST00000425573 462 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms