Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 FTH1P1-201ENST00000437933 532 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AC112653.1-201ENST00000443851 386 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AP000936.2-201ENST00000447151 681 ntBASIC3.16□□□□□ -1.9
ACLYP53396 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 CDC42P1-201ENST00000456658 548 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.16□□□□□ -1.9
ACLYP53396 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ACLYP53396 AC112518.2-201ENST00000508565 425 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ACLYP53396 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.16□□□□□ -1.9
ACLYP53396 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ACLYP53396 TRAV37-201ENST00000553906 342 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 NIFKP8-201ENST00000560500 874 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.16□□□□□ -1.9
ACLYP53396 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.16□□□□□ -1.9
ACLYP53396 AC133794.1-201ENST00000602731 914 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.16□□□□□ -1.9
ACLYP53396 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.16□□□□□ -1.9
ACLYP53396 AC091948.2-201ENST00000636510 279 ntBASIC3.16□□□□□ -1.9
ACLYP53396 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.16□□□□□ -1.9
ACLYP53396 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ACLYP53396 AC004925.1-201ENST00000624256 2706 ntBASIC3.16□□□□□ -1.9
ACLYP53396 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
ACLYP53396 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
ACLYP53396 MIR591-201ENST00000385290 95 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AP002784.2-201ENST00000397300 549 ntBASIC3.15□□□□□ -1.91
ACLYP53396 U3.42-201ENST00000408746 214 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.15□□□□□ -1.91
ACLYP53396 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.15□□□□□ -1.91
ACLYP53396 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.15□□□□□ -1.91
ACLYP53396 AC246680.2-201ENST00000422106 389 ntBASIC3.15□□□□□ -1.91
ACLYP53396 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
ACLYP53396 RPL23AP22-201ENST00000437556 453 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.15□□□□□ -1.91
ACLYP53396 AL513328.1-201ENST00000446460 224 ntBASIC3.15□□□□□ -1.91
ACLYP53396 HMGB1P15-201ENST00000453854 435 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.15□□□□□ -1.91
ACLYP53396 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ACLYP53396 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ACLYP53396 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ACLYP53396 YWHAEP4-201ENST00000505390 198 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AC119751.1-201ENST00000513357 765 ntBASIC3.15□□□□□ -1.91
ACLYP53396 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ACLYP53396 AC068657.1-201ENST00000520807 306 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.15□□□□□ -1.91
ACLYP53396 AC010198.2-201ENST00000550612 259 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.15□□□□□ -1.91
ACLYP53396 AC234778.2-201ENST00000566241 354 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AC008507.1-201ENST00000587506 734 ntBASIC3.15□□□□□ -1.91
ACLYP53396 AC022509.4-201ENST00000621404 572 ntBASIC3.15□□□□□ -1.91
ACLYP53396 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.15□□□□□ -1.91
ACLYP53396 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ACLYP53396 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ACLYP53396 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ACLYP53396 ZNF849P-201ENST00000594711 1566 ntBASIC3.14□□□□□ -1.91
ACLYP53396 RNU6-50P-201ENST00000362356 103 ntBASIC3.14□□□□□ -1.91
ACLYP53396 RNU6-619P-201ENST00000365146 108 ntBASIC3.14□□□□□ -1.91
ACLYP53396 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ACLYP53396 AL121978.1-201ENST00000402778 359 ntBASIC3.14□□□□□ -1.91
ACLYP53396 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ACLYP53396 MTCO3P12-201ENST00000416718 547 ntBASIC3.14□□□□□ -1.91
ACLYP53396 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.14□□□□□ -1.91
ACLYP53396 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.14□□□□□ -1.91
ACLYP53396 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.14□□□□□ -1.91
ACLYP53396 MTCYBP31-201ENST00000438855 1122 ntBASIC3.14□□□□□ -1.91
ACLYP53396 HMGB3P6-201ENST00000444896 598 ntBASIC3.14□□□□□ -1.91
ACLYP53396 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.14□□□□□ -1.91
ACLYP53396 AC012181.1-201ENST00000479895 423 ntBASIC3.14□□□□□ -1.91
ACLYP53396 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
ACLYP53396 KCTD9P5-201ENST00000504141 1170 ntBASIC3.14□□□□□ -1.91
ACLYP53396 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
ACLYP53396 RNA5SP468-201ENST00000516782 93 ntBASIC3.14□□□□□ -1.91
ACLYP53396 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.14□□□□□ -1.91
ACLYP53396 OR8K2P-201ENST00000524645 927 ntBASIC3.14□□□□□ -1.91
ACLYP53396 LSM6P2-201ENST00000552208 177 ntBASIC3.14□□□□□ -1.91
ACLYP53396 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.14□□□□□ -1.91
ACLYP53396 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.14□□□□□ -1.91
ACLYP53396 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.14□□□□□ -1.91
ACLYP53396 AL845331.3-202ENST00000562856 261 ntBASIC3.14□□□□□ -1.91
ACLYP53396 MTCO1P40-201ENST00000574371 625 ntBASIC3.14□□□□□ -1.91
ACLYP53396 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.14□□□□□ -1.91
ACLYP53396 AC006254.3-201ENST00000603353 884 ntBASIC3.14□□□□□ -1.91
ACLYP53396 AC128687.1-201ENST00000605304 619 ntBASIC3.14□□□□□ -1.91
ACLYP53396 AL365400.2-201ENST00000605604 902 ntBASIC3.14□□□□□ -1.91
ACLYP53396 AC073968.1-201ENST00000618594 637 ntBASIC3.14□□□□□ -1.91
ACLYP53396 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.14□□□□□ -1.91
ACLYP53396 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.14□□□□□ -1.91
ACLYP53396 AL590396.4-201ENST00000636779 956 ntBASIC3.14□□□□□ -1.91
ACLYP53396 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.14□□□□□ -1.91
ACLYP53396 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ACLYP53396 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.14□□□□□ -1.91
ACLYP53396 AC130650.2-201ENST00000618736 2403 ntBASIC3.13□□□□□ -1.91
ACLYP53396 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms