Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 RNU6-1078P-201ENST00000364522 103 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AL445529.1-201ENST00000398713 389 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AC007161.1-204ENST00000423039 460 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AL360081.1-201ENST00000428299 555 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.13□□□□□ -1.27
PRIM1P49642 GSTM5P1-201ENST00000434751 660 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AL596266.1-201ENST00000448132 400 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 MTCO3P8-201ENST00000453691 755 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 TOMM22P4-201ENST00000511318 336 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.13□□□□□ -1.27
PRIM1P49642 TBCAP3-201ENST00000512475 312 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 RNU7-4P-201ENST00000516961 62 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AC100870.1-201ENST00000522035 505 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.13□□□□□ -1.27
PRIM1P49642 AC025857.2-201ENST00000602711 238 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 SDR42E1P2-201ENST00000614861 481 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 SDR42E1P4-201ENST00000620894 481 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
PRIM1P49642 AC074101.1-201ENST00000637861 241 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.13□□□□□ -1.27
PRIM1P49642 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRIM1P49642 AC008669.1-201ENST00000565823 2178 ntBASIC7.13□□□□□ -1.27
PRIM1P49642 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PRIM1P49642 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.13□□□□□ -1.27
PRIM1P49642 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
PRIM1P49642 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PRIM1P49642 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.12□□□□□ -1.27
PRIM1P49642 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PRIM1P49642 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PRIM1P49642 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PRIM1P49642 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PRIM1P49642 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PRIM1P49642 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.12□□□□□ -1.27
PRIM1P49642 RNU4-50P-201ENST00000364361 141 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 RNU6-398P-201ENST00000384143 109 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 RNU6-432P-201ENST00000384196 109 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 Y_RNA.477-201ENST00000384352 108 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AC011933.1-201ENST00000413334 321 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 MTCO3P19-201ENST00000415864 321 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 RPL21P109-201ENST00000422213 475 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 UBE2V1P4-201ENST00000425374 344 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC7.12□□□□□ -1.27
PRIM1P49642 RHOT1P3-201ENST00000436571 331 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.12□□□□□ -1.27
PRIM1P49642 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC7.12□□□□□ -1.27
PRIM1P49642 IGLV2-34-201ENST00000490007 283 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 HMGB1P35-201ENST00000503360 598 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 COX7A2P2-201ENST00000505291 250 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC7.12□□□□□ -1.27
PRIM1P49642 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PRIM1P49642 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC7.12□□□□□ -1.27
PRIM1P49642 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.12□□□□□ -1.27
PRIM1P49642 SCARNA16.4-201ENST00000516956 187 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC7.12□□□□□ -1.27
PRIM1P49642 AC092490.3-201ENST00000545370 572 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 SARNP-203ENST00000552080 726 ntTSL 2 BASIC7.12□□□□□ -1.27
PRIM1P49642 MIR4330-201ENST00000579077 105 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 AL031176.1-201ENST00000604554 466 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC7.12□□□□□ -1.27
PRIM1P49642 AL359547.2-201ENST00000615810 418 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AL731566.2-201ENST00000618971 317 ntBASIC7.12□□□□□ -1.27
PRIM1P49642 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PRIM1P49642 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PRIM1P49642 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.11□□□□□ -1.27
PRIM1P49642 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 OSBPL9P4-201ENST00000371707 1800 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PRIM1P49642 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 SNORA17.1-201ENST00000362945 126 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 Y_RNA.214-201ENST00000364201 112 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 Y_RNA.222-201ENST00000364264 102 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 RNU6-190P-201ENST00000384154 102 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 RNA5SP91-201ENST00000390902 119 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 SNORA16.2-201ENST00000390991 127 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 RNU6-516P-201ENST00000411381 104 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC7.11□□□□□ -1.27
PRIM1P49642 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC7.11□□□□□ -1.27
PRIM1P49642 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PRIM1P49642 AC073410.1-201ENST00000435125 589 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC7.11□□□□□ -1.27
PRIM1P49642 RPL17P19-201ENST00000489069 552 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 AC083829.1-201ENST00000503756 657 ntBASIC7.11□□□□□ -1.27
PRIM1P49642 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms