Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SNORD105B-201ENST00000458770 79 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC012158.1-204ENST00000483430 465 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC026784.1-201ENST00000507986 352 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 AC091965.2-201ENST00000512324 613 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 MTCO3P28-201ENST00000513351 515 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 RNA5SP164-201ENST00000516533 110 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 RN7SKP289-201ENST00000517244 295 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.47□□□□□ -1.69
TM4SF4P48230 MTCYBP41-201ENST00000528913 1123 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.47□□□□□ -1.69
TM4SF4P48230 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.47□□□□□ -1.69
TM4SF4P48230 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.47□□□□□ -1.69
TM4SF4P48230 AC010928.3-201ENST00000587712 541 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 AC138649.5-201ENST00000637456 137 ntBASIC4.47□□□□□ -1.69
TM4SF4P48230 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TM4SF4P48230 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
TM4SF4P48230 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
TM4SF4P48230 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 XIAPP3-201ENST00000312918 795 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 SNORA7.2-201ENST00000364446 145 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 RNY3P10-201ENST00000384764 102 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 PGBD4P8-201ENST00000412993 562 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.46□□□□□ -1.7
TM4SF4P48230 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.46□□□□□ -1.7
TM4SF4P48230 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.46□□□□□ -1.7
TM4SF4P48230 AC109583.1-201ENST00000432156 268 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.46□□□□□ -1.7
TM4SF4P48230 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.46□□□□□ -1.7
TM4SF4P48230 Z74696.2-201ENST00000436514 498 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 AC083863.1-201ENST00000438811 231 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 FAM103A2P-201ENST00000444122 354 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 COX6CP12-201ENST00000446748 202 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 HMGN2P21-201ENST00000447764 270 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 AC108751.2-201ENST00000469993 231 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 AC022795.1-201ENST00000473808 480 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 AC068724.1-201ENST00000487100 792 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.46□□□□□ -1.7
TM4SF4P48230 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.46□□□□□ -1.7
TM4SF4P48230 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.46□□□□□ -1.7
TM4SF4P48230 AP000403.1-201ENST00000603349 851 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 YPEL5P2-201ENST00000605553 359 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.46□□□□□ -1.7
TM4SF4P48230 AL158196.1-201ENST00000616786 434 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 MIR8057-201ENST00000620957 69 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
TM4SF4P48230 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
TM4SF4P48230 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TM4SF4P48230 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
TM4SF4P48230 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TM4SF4P48230 AC018529.3-201ENST00000624212 2254 ntBASIC4.46□□□□□ -1.7
TM4SF4P48230 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TM4SF4P48230 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.45□□□□□ -1.7
TM4SF4P48230 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 MTND4P4-201ENST00000439033 1366 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 RNA5SP502-201ENST00000362694 119 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TM4SF4P48230 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TM4SF4P48230 AL138880.1-201ENST00000405824 642 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AL359704.1-201ENST00000411586 781 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.45□□□□□ -1.7
TM4SF4P48230 OR1AA1P-201ENST00000419597 916 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 CYCSP4-201ENST00000429682 331 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AC073063.1-201ENST00000434352 607 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.45□□□□□ -1.7
TM4SF4P48230 AC073387.1-201ENST00000453261 709 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 DNAJC19P1-201ENST00000455312 319 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AC080014.1-201ENST00000496877 1201 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AC078918.1-201ENST00000498515 228 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.45□□□□□ -1.7
TM4SF4P48230 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.45□□□□□ -1.7
TM4SF4P48230 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.45□□□□□ -1.7
TM4SF4P48230 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 AC018630.1-201ENST00000541376 925 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.45□□□□□ -1.7
TM4SF4P48230 AC022968.1-201ENST00000567372 442 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AC008759.1-201ENST00000589783 983 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AC004825.2-201ENST00000616634 455 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 AL713922.2-201ENST00000619384 716 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.45□□□□□ -1.7
TM4SF4P48230 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.45□□□□□ -1.7
TM4SF4P48230 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.45□□□□□ -1.7
TM4SF4P48230 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TM4SF4P48230 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TM4SF4P48230 AL157700.1-201ENST00000561973 1432 ntBASIC4.45□□□□□ -1.7
TM4SF4P48230 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.45□□□□□ -1.7
TM4SF4P48230 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM4SF4P48230 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms