Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 XIAPP1-201ENST00000603162 600 ntBASIC3.02□□□□□ -1.93
RORAP35398 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RORAP35398 AL162274.2-201ENST00000614406 332 ntBASIC3.02□□□□□ -1.93
RORAP35398 AC073476.4-201ENST00000628409 72 ntBASIC3.02□□□□□ -1.93
RORAP35398 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
RORAP35398 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RORAP35398 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
RORAP35398 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
RORAP35398 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.02□□□□□ -1.93
RORAP35398 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RORAP35398 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.02□□□□□ -1.93
RORAP35398 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RORAP35398 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.01□□□□□ -1.93
RORAP35398 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RORAP35398 RNU6-582P-201ENST00000362989 107 ntBASIC3.01□□□□□ -1.93
RORAP35398 RNU6-115P-201ENST00000364310 107 ntBASIC3.01□□□□□ -1.93
RORAP35398 RNU6-730P-201ENST00000383954 104 ntBASIC3.01□□□□□ -1.93
RORAP35398 UBA52P6-201ENST00000399822 382 ntBASIC3.01□□□□□ -1.93
RORAP35398 BMS1P22-201ENST00000414726 313 ntBASIC3.01□□□□□ -1.93
RORAP35398 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.01□□□□□ -1.93
RORAP35398 AC006548.1-201ENST00000427470 102 ntBASIC3.01□□□□□ -1.93
RORAP35398 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.01□□□□□ -1.93
RORAP35398 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
RORAP35398 HMGN1P5-201ENST00000448591 263 ntBASIC3.01□□□□□ -1.93
RORAP35398 AC011825.1-201ENST00000484967 388 ntBASIC3.01□□□□□ -1.93
RORAP35398 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.01□□□□□ -1.93
RORAP35398 RNA5SP135-201ENST00000517019 125 ntBASIC3.01□□□□□ -1.93
RORAP35398 SNORA31.26-201ENST00000517250 137 ntBASIC3.01□□□□□ -1.93
RORAP35398 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.01□□□□□ -1.93
RORAP35398 AP001804.3-201ENST00000525146 880 ntBASIC3.01□□□□□ -1.93
RORAP35398 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RORAP35398 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.01□□□□□ -1.93
RORAP35398 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.01□□□□□ -1.93
RORAP35398 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.01□□□□□ -1.93
RORAP35398 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.01□□□□□ -1.93
RORAP35398 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.01□□□□□ -1.93
RORAP35398 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.01□□□□□ -1.93
RORAP35398 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.01□□□□□ -1.93
RORAP35398 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.01□□□□□ -1.93
RORAP35398 MTATP6P2-201ENST00000603319 678 ntBASIC3.01□□□□□ -1.93
RORAP35398 AC106791.2-201ENST00000604680 391 ntBASIC3.01□□□□□ -1.93
RORAP35398 AP005137.2-201ENST00000609238 400 ntBASIC3.01□□□□□ -1.93
RORAP35398 VN1R74P-201ENST00000613259 503 ntBASIC3.01□□□□□ -1.93
RORAP35398 AC100793.4-201ENST00000613683 429 ntBASIC3.01□□□□□ -1.93
RORAP35398 AP003122.6-201ENST00000623831 495 ntBASIC3.01□□□□□ -1.93
RORAP35398 CR381572.1-201ENST00000625098 102 ntBASIC3.01□□□□□ -1.93
RORAP35398 MIR622-201ENST00000638396 96 ntBASIC3.01□□□□□ -1.93
RORAP35398 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
RORAP35398 AC139713.2-210ENST00000641741 992 ntBASIC3.01□□□□□ -1.93
RORAP35398 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.01□□□□□ -1.93
RORAP35398 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.01□□□□□ -1.93
RORAP35398 API5P2-201ENST00000397055 1498 ntBASIC3.01□□□□□ -1.93
RORAP35398 AC130650.2-201ENST00000618736 2403 ntBASIC3.01□□□□□ -1.93
RORAP35398 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RORAP35398 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
RORAP35398 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RORAP35398 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3□□□□□ -1.93
RORAP35398 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3□□□□□ -1.93
RORAP35398 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3□□□□□ -1.93
RORAP35398 RNU5B-4P-201ENST00000363508 111 ntBASIC3□□□□□ -1.93
RORAP35398 MIR634-201ENST00000385208 97 ntBASIC3□□□□□ -1.93
RORAP35398 AL355615.1-201ENST00000406187 641 ntBASIC3□□□□□ -1.93
RORAP35398 AL023807.1-201ENST00000407932 359 ntBASIC3□□□□□ -1.93
RORAP35398 RN7SKP58-201ENST00000411010 305 ntBASIC3□□□□□ -1.93
RORAP35398 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
RORAP35398 AL035410.1-201ENST00000427409 427 ntBASIC3□□□□□ -1.93
RORAP35398 AC093151.1-201ENST00000427711 313 ntBASIC3□□□□□ -1.93
RORAP35398 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3□□□□□ -1.93
RORAP35398 AC005345.1-201ENST00000431868 217 ntBASIC3□□□□□ -1.93
RORAP35398 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3□□□□□ -1.93
RORAP35398 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3□□□□□ -1.93
RORAP35398 MTCYBP34-201ENST00000439552 670 ntBASIC3□□□□□ -1.93
RORAP35398 COX6CP18-201ENST00000448769 222 ntBASIC3□□□□□ -1.93
RORAP35398 TRBV26-201ENST00000456572 344 ntBASIC3□□□□□ -1.93
RORAP35398 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3□□□□□ -1.93
RORAP35398 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3□□□□□ -1.93
RORAP35398 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3□□□□□ -1.93
RORAP35398 SCARNA13-201ENST00000516672 275 ntBASIC3□□□□□ -1.93
RORAP35398 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3□□□□□ -1.93
RORAP35398 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3□□□□□ -1.93
RORAP35398 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3□□□□□ -1.93
RORAP35398 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3□□□□□ -1.93
RORAP35398 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3□□□□□ -1.93
RORAP35398 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3□□□□□ -1.93
RORAP35398 AC007536.1-201ENST00000533382 349 ntBASIC3□□□□□ -1.93
RORAP35398 AC087481.2-201ENST00000565492 330 ntBASIC3□□□□□ -1.93
RORAP35398 UBL5P2-201ENST00000583788 219 ntBASIC3□□□□□ -1.93
RORAP35398 AC008759.3-201ENST00000613300 508 ntBASIC3□□□□□ -1.93
RORAP35398 uc_338.25-201ENST00000613756 156 ntBASIC3□□□□□ -1.93
RORAP35398 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3□□□□□ -1.93
RORAP35398 AL360181.4-201ENST00000621752 134 ntBASIC3□□□□□ -1.93
RORAP35398 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3□□□□□ -1.93
RORAP35398 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3□□□□□ -1.93
RORAP35398 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
RORAP35398 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3□□□□□ -1.93
RORAP35398 SGO1P2-201ENST00000429458 1589 ntBASIC3□□□□□ -1.93
RORAP35398 AC111188.2-201ENST00000529697 1387 ntBASIC3□□□□□ -1.93
RORAP35398 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RORAP35398 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
RORAP35398 OR5BR1P-201ENST00000524992 1330 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms