Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC233728.2-201ENST00000425348 757 ntBASIC2.69□□□□□ -1.98
RPA3P35244 DPPA2P1-201ENST00000428060 556 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC079780.1-201ENST00000428259 207 ntBASIC2.69□□□□□ -1.98
RPA3P35244 TRIM60P13-201ENST00000432350 1283 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.69□□□□□ -1.98
RPA3P35244 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.69□□□□□ -1.98
RPA3P35244 HSPE1P28-201ENST00000443139 211 ntBASIC2.69□□□□□ -1.98
RPA3P35244 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.69□□□□□ -1.98
RPA3P35244 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.69□□□□□ -1.98
RPA3P35244 AC093392.2-201ENST00000450682 337 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC104073.1-201ENST00000451988 151 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.69□□□□□ -1.98
RPA3P35244 AL445669.2-201ENST00000454425 421 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.69□□□□□ -1.98
RPA3P35244 AC015908.1-201ENST00000478739 476 ntBASIC2.69□□□□□ -1.98
RPA3P35244 GAPDHP39-201ENST00000481866 979 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.69□□□□□ -1.98
RPA3P35244 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPA3P35244 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.69□□□□□ -1.98
RPA3P35244 AC034268.2-201ENST00000571784 482 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC022069.1-201ENST00000582910 658 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.69□□□□□ -1.98
RPA3P35244 BNIP3P4-201ENST00000604946 565 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC008277.2-201ENST00000605196 797 ntBASIC2.69□□□□□ -1.98
RPA3P35244 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.69□□□□□ -1.98
RPA3P35244 AC004832.5-201ENST00000608677 401 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AP001033.2-201ENST00000609701 1003 ntBASIC2.69□□□□□ -1.98
RPA3P35244 VIS1.1-201ENST00000610517 203 ntBASIC2.69□□□□□ -1.98
RPA3P35244 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.69□□□□□ -1.98
RPA3P35244 AL163051.2-201ENST00000618976 735 ntBASIC2.69□□□□□ -1.98
RPA3P35244 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.69□□□□□ -1.98
RPA3P35244 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.69□□□□□ -1.98
RPA3P35244 MTND2P41-201ENST00000637599 773 ntBASIC2.69□□□□□ -1.98
RPA3P35244 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPA3P35244 MTND5P31-201ENST00000419366 1374 ntBASIC2.69□□□□□ -1.98
RPA3P35244 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPA3P35244 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.69□□□□□ -1.98
RPA3P35244 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
RPA3P35244 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPA3P35244 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
RPA3P35244 DEFA7P-201ENST00000382676 285 ntBASIC2.68□□□□□ -1.98
RPA3P35244 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.68□□□□□ -1.98
RPA3P35244 AL035410.1-201ENST00000427409 427 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPA3P35244 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.68□□□□□ -1.98
RPA3P35244 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 AC107083.1-201ENST00000439643 279 ntBASIC2.68□□□□□ -1.98
RPA3P35244 RSL24D1P2-201ENST00000445584 366 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 CACYBPP2-201ENST00000453625 678 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 RPL21P8-201ENST00000465083 535 ntBASIC2.68□□□□□ -1.98
RPA3P35244 KC877373.1-201ENST00000479066 408 ntBASIC2.68□□□□□ -1.98
RPA3P35244 RPS27P27-201ENST00000498779 255 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.68□□□□□ -1.98
RPA3P35244 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.68□□□□□ -1.98
RPA3P35244 RNU6-751P-201ENST00000516382 101 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC022784.5-201ENST00000522241 437 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC239860.2-201ENST00000525886 270 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC123904.3-201ENST00000547218 814 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC126177.3-201ENST00000551839 688 ntBASIC2.68□□□□□ -1.98
RPA3P35244 CYCSP39-201ENST00000565821 309 ntBASIC2.68□□□□□ -1.98
RPA3P35244 LARP7P3-201ENST00000579888 337 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC096586.1-201ENST00000610267 561 ntBASIC2.68□□□□□ -1.98
RPA3P35244 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.68□□□□□ -1.98
RPA3P35244 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
RPA3P35244 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.68□□□□□ -1.98
RPA3P35244 AC025263.3-201ENST00000622965 1396 ntBASIC2.68□□□□□ -1.98
RPA3P35244 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.68□□□□□ -1.98
RPA3P35244 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
RPA3P35244 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.68□□□□□ -1.98
RPA3P35244 AC110774.1-201ENST00000623567 2018 ntBASIC2.68□□□□□ -1.98
RPA3P35244 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RPA3P35244 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RPA3P35244 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RPA3P35244 RNU6-525P-201ENST00000363685 104 ntBASIC2.67□□□□□ -1.98
RPA3P35244 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.67□□□□□ -1.98
RPA3P35244 RNU6-921P-201ENST00000384361 107 ntBASIC2.67□□□□□ -1.98
RPA3P35244 MTND4LP20-201ENST00000402379 270 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
RPA3P35244 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.67□□□□□ -1.98
RPA3P35244 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
RPA3P35244 AL158825.1-201ENST00000414735 521 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.67□□□□□ -1.98
RPA3P35244 AC009237.2-201ENST00000421358 284 ntBASIC2.67□□□□□ -1.98
RPA3P35244 CR848007.2-201ENST00000424918 787 ntBASIC2.67□□□□□ -1.98
RPA3P35244 MTATP6P4-201ENST00000427725 675 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AC025750.2-201ENST00000442609 450 ntBASIC2.67□□□□□ -1.98
RPA3P35244 RPL23AP31-201ENST00000456160 467 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AC108729.2-201ENST00000476543 840 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AC006483.1-201ENST00000487308 313 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.67□□□□□ -1.98
RPA3P35244 AC096751.1-202ENST00000502691 1067 ntBASIC2.67□□□□□ -1.98
RPA3P35244 AC097462.2-201ENST00000504623 481 ntBASIC2.67□□□□□ -1.98
RPA3P35244 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPA3P35244 MTCYBP37-201ENST00000510642 1133 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms