Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC126177.3-201ENST00000551839 688 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 AC245505.1-201ENST00000556398 224 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 RN7SL600P-201ENST00000581811 299 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CNGA1P29973 AC068790.3-201ENST00000602988 553 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 BPIFA4P-203ENST00000603168 689 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 AC006254.3-201ENST00000603353 884 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 AC024220.1-201ENST00000603675 484 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 AC079587.1-201ENST00000603846 277 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.96□□□□□ -1.62
CNGA1P29973 AC007546.1-201ENST00000619452 559 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 AC095031.1-201ENST00000623685 672 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 AC112200.1-201ENST00000625015 234 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.96□□□□□ -1.62
CNGA1P29973 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CNGA1P29973 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.96□□□□□ -1.62
CNGA1P29973 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.96□□□□□ -1.62
CNGA1P29973 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CNGA1P29973 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.96□□□□□ -1.62
CNGA1P29973 AL645937.1-201ENST00000641739 1652 ntBASIC4.96□□□□□ -1.62
CNGA1P29973 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CNGA1P29973 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.95□□□□□ -1.62
CNGA1P29973 PTMAP2-201ENST00000397627 327 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.95□□□□□ -1.62
CNGA1P29973 Y_RNA.619-201ENST00000410951 90 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AF274854.1-201ENST00000413236 615 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AL137014.1-201ENST00000420490 1226 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AC099677.1-201ENST00000420575 175 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.95□□□□□ -1.62
CNGA1P29973 EIF4EP1-201ENST00000422311 642 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 FTH1P1-201ENST00000437933 532 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 RPS29P7-201ENST00000439662 171 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.95□□□□□ -1.62
CNGA1P29973 AL358232.1-201ENST00000448030 501 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 NDUFS5P3-201ENST00000450668 321 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AL162388.1-201ENST00000450912 352 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 UBDP1-202ENST00000457888 382 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 MTCO2P4-201ENST00000517968 247 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 MYL12AP1-201ENST00000518490 515 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.95□□□□□ -1.62
CNGA1P29973 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.95□□□□□ -1.62
CNGA1P29973 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.95□□□□□ -1.62
CNGA1P29973 AC105233.3-201ENST00000531125 744 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.95□□□□□ -1.62
CNGA1P29973 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.95□□□□□ -1.62
CNGA1P29973 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.95□□□□□ -1.62
CNGA1P29973 AL161729.4-201ENST00000604650 476 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AC121334.2-201ENST00000605387 271 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AC008966.2-201ENST00000606157 453 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AC013476.2-201ENST00000614456 459 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 AC068792.1-201ENST00000621354 417 ntBASIC4.95□□□□□ -1.62
CNGA1P29973 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CNGA1P29973 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.95□□□□□ -1.62
CNGA1P29973 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CNGA1P29973 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CNGA1P29973 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
CNGA1P29973 RNU6-1078P-201ENST00000364522 103 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 RNY4P34-201ENST00000364779 95 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 RNA5SP151-201ENST00000365632 117 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 RNU6-259P-201ENST00000383999 107 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 RNU6-1215P-201ENST00000384441 102 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.94□□□□□ -1.62
CNGA1P29973 BEND7P1-201ENST00000422058 457 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 AC104651.1-201ENST00000427559 735 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 COX6B1P7-201ENST00000430845 235 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 DNAJC19P4-201ENST00000440115 345 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 RAC1P7-201ENST00000445367 377 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.94□□□□□ -1.62
CNGA1P29973 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 RPS27AP13-201ENST00000498403 237 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 AC146944.2-203ENST00000502493 354 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 AC139495.1-202ENST00000513164 354 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.94□□□□□ -1.62
CNGA1P29973 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.94□□□□□ -1.62
CNGA1P29973 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.94□□□□□ -1.62
CNGA1P29973 AC018630.1-201ENST00000541376 925 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.94□□□□□ -1.62
CNGA1P29973 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 RPL21P7-201ENST00000557463 483 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 MIR4444-1-201ENST00000581696 74 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 MIR3118-1-201ENST00000581787 76 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 MIR4444-2-201ENST00000584390 74 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 AC091178.1-203ENST00000584586 279 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 NRBF2P1-201ENST00000587407 859 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 DUXAP4-201ENST00000603046 613 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 XIAPP1-201ENST00000603162 600 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 RNU4-89P-201ENST00000607443 133 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 AC026585.1-201ENST00000619582 524 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 AC091953.2-201ENST00000623979 160 ntBASIC4.94□□□□□ -1.62
CNGA1P29973 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CNGA1P29973 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CNGA1P29973 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms