Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC004263.1-201ENST00000479327 332 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
COL4A5P29400 SNORD116-30-201ENST00000516468 85 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A5P29400 MIR6132-201ENST00000622083 109 ntBASIC2.5□□□□□ -2.01
COL4A5P29400 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.49□□□□□ -2.01
COL4A5P29400 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A5P29400 AC011155.1-201ENST00000316512 456 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 EI24P1-201ENST00000416584 867 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 AC009965.2-201ENST00000425328 970 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 BUD31P2-201ENST00000449374 300 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.49□□□□□ -2.01
COL4A5P29400 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.49□□□□□ -2.01
COL4A5P29400 AP001960.1-201ENST00000506494 658 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A5P29400 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.49□□□□□ -2.01
COL4A5P29400 SNRPGP19-201ENST00000603826 189 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 AC012213.4-201ENST00000606457 354 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.49□□□□□ -2.01
COL4A5P29400 AP005212.4-201ENST00000614206 710 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 AL136964.1-201ENST00000622038 2990 ntBASIC2.49□□□□□ -2.01
COL4A5P29400 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL4A5P29400 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL4A5P29400 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A5P29400 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A5P29400 RN7SKP226-201ENST00000364912 300 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A5P29400 MIR583-201ENST00000384846 75 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC2.48□□□□□ -2.01
COL4A5P29400 AL353729.1-201ENST00000425044 720 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 AC093151.1-201ENST00000427711 313 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 RPL36AP6-201ENST00000435770 321 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 MTCO3P17-201ENST00000443775 513 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A5P29400 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A5P29400 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A5P29400 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A5P29400 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A5P29400 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A5P29400 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.48□□□□□ -2.01
COL4A5P29400 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.48□□□□□ -2.01
COL4A5P29400 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A5P29400 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A5P29400 AL590410.1-201ENST00000617925 333 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.48□□□□□ -2.01
COL4A5P29400 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
COL4A5P29400 AC092159.4-201ENST00000624944 550 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 AC009950.2-201ENST00000636548 183 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A5P29400 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A5P29400 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A5P29400 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.48□□□□□ -2.01
COL4A5P29400 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.48□□□□□ -2.01
COL4A5P29400 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
COL4A5P29400 AL109809.4-201ENST00000603520 2185 ntBASIC2.48□□□□□ -2.01
COL4A5P29400 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A5P29400 MT-TP-201ENST00000387461 68 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 RNA5SP498-201ENST00000411342 120 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A5P29400 ELOCP13-201ENST00000443934 329 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 GSTA11P-201ENST00000452866 669 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 AC092185.1-201ENST00000491371 97 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 OR52A4P-203ENST00000498233 1014 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.47□□□□□ -2.01
COL4A5P29400 SNORD116-26-201ENST00000516006 96 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 MIR4716-201ENST00000579628 84 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 LRRC37A5P-203ENST00000580181 585 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 AC023043.3-201ENST00000593113 385 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 AC091953.2-201ENST00000623979 160 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
COL4A5P29400 MTND5P27-201ENST00000428871 1720 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.47□□□□□ -2.01
COL4A5P29400 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.47□□□□□ -2.01
COL4A5P29400 SNORA25.9-201ENST00000365087 128 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 SNORA48.3-201ENST00000391081 134 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 RNU6-1140P-201ENST00000410517 106 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A5P29400 MTCYBP29-201ENST00000436327 1006 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A5P29400 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A5P29400 RPL23AP16-201ENST00000441715 421 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A5P29400 GAPDHP27-201ENST00000447427 1020 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 RPL7P31-201ENST00000450192 724 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 CALM1P2-201ENST00000452941 448 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 AC010683.1-201ENST00000473673 378 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 LARP7P4-201ENST00000481075 878 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.47□□□□□ -2.01
COL4A5P29400 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A5P29400 RPL23AP61-201ENST00000623642 466 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 AC084035.1-201ENST00000634543 607 ntBASIC2.47□□□□□ -2.01
COL4A5P29400 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL4A5P29400 SNORD65-201ENST00000391079 73 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 SNORA40.18-201ENST00000391200 128 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 NDUFB4P5-201ENST00000415445 361 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 UBE2V2P1-201ENST00000434717 398 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.46□□□□□ -2.02
COL4A5P29400 EXTL2P1-201ENST00000446218 416 ntBASIC2.46□□□□□ -2.02
COL4A5P29400 FABP5P13-201ENST00000452144 328 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms