Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AL360181.4-201ENST00000621752 134 ntBASIC3.38□□□□□ -1.87
PTPN4P29074 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPN4P29074 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN4P29074 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN4P29074 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.38□□□□□ -1.87
PTPN4P29074 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PTPN4P29074 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN4P29074 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN4P29074 AP005901.5-201ENST00000545779 1796 ntBASIC3.38□□□□□ -1.87
PTPN4P29074 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN4P29074 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
PTPN4P29074 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN4P29074 RNU1-33P-201ENST00000364249 162 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 RNU6-878P-201ENST00000384578 110 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 RPL21P3-201ENST00000395517 478 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN4P29074 RN7SKP53-201ENST00000411337 315 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC106883.1-201ENST00000418805 562 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 MRPS36P1-201ENST00000421291 307 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC012065.2-201ENST00000421295 375 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN4P29074 MTCO2P23-201ENST00000425216 680 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AL645638.1-201ENST00000440519 361 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 EXOSC3P1-201ENST00000448649 500 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC146507.2-201ENST00000460608 476 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 RPL21P10-201ENST00000463521 490 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AL136126.1-201ENST00000473603 402 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC017015.1-201ENST00000477387 286 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 RN7SL283P-201ENST00000489055 303 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC010460.2-201ENST00000509054 677 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC010625.1-201ENST00000511296 403 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN4P29074 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN4P29074 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC018630.1-201ENST00000541376 925 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC090502.2-201ENST00000549267 280 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC010198.2-201ENST00000550612 259 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC011611.1-201ENST00000552179 197 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPN4P29074 MIR5186-201ENST00000577504 120 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 AC095031.1-201ENST00000623685 672 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPN4P29074 AC106754.1-201ENST00000562632 1513 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTPN4P29074 AC092326.2-201ENST00000624772 1561 ntBASIC3.37□□□□□ -1.87
PTPN4P29074 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
PTPN4P29074 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.37□□□□□ -1.87
PTPN4P29074 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPN4P29074 AC017071.1-201ENST00000564407 2204 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN4P29074 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPN4P29074 MFSD8-233ENST00000641482 4860 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTPN4P29074 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTPN4P29074 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN4P29074 RPS3AP26-201ENST00000398259 784 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 MTCO2P8-201ENST00000412213 658 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN4P29074 RPL21P32-201ENST00000419877 477 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN4P29074 AC012498.1-201ENST00000424037 437 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN4P29074 DUTP6-201ENST00000425573 462 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC091390.3-201ENST00000426478 338 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPN4P29074 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN4P29074 ATP5JP1-201ENST00000431631 322 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPN4P29074 AC093155.1-201ENST00000440164 826 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPN4P29074 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PTPN4P29074 AL031313.1-201ENST00000448435 256 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 COX6CP18-201ENST00000448769 222 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC108734.3-201ENST00000481241 1165 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 RNU6-415P-201ENST00000516252 97 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 RNU1-143P-201ENST00000516296 146 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 SNORA70.18-201ENST00000516696 98 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
PTPN4P29074 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTPN4P29074 EEF1B2P4-201ENST00000551398 348 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AL391156.1-201ENST00000554965 554 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 AC087481.2-201ENST00000565492 330 ntBASIC3.36□□□□□ -1.87
PTPN4P29074 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms