Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZNF734P-201ENST00000419494 1534 ntBASIC3.6□□□□□ -1.83
CDH3P22223 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH3P22223 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH3P22223 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH3P22223 AL079343.1-201ENST00000572358 1771 ntBASIC3.59□□□□□ -1.83
CDH3P22223 OR5H2-201ENST00000355273 945 ntBASIC3.59□□□□□ -1.83
CDH3P22223 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH3P22223 RNU6-1181P-201ENST00000384191 106 ntBASIC3.59□□□□□ -1.83
CDH3P22223 RNA5SP424-201ENST00000390988 115 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC007066.1-201ENST00000392902 381 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AL590084.2-201ENST00000401481 382 ntBASIC3.59□□□□□ -1.83
CDH3P22223 DHFRP6-201ENST00000401776 268 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AL121972.1-201ENST00000402023 252 ntBASIC3.59□□□□□ -1.83
CDH3P22223 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH3P22223 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH3P22223 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH3P22223 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH3P22223 AC069157.1-201ENST00000421749 137 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AL513174.1-201ENST00000423182 629 ntBASIC3.59□□□□□ -1.83
CDH3P22223 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH3P22223 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH3P22223 AC127537.2-201ENST00000439258 465 ntBASIC3.59□□□□□ -1.83
CDH3P22223 MTND2P19-201ENST00000449129 1012 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC006480.1-201ENST00000449887 378 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AL133217.1-201ENST00000450980 425 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH3P22223 USP9YP34-201ENST00000453983 808 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC006539.3-201ENST00000454258 129 ntBASIC3.59□□□□□ -1.83
CDH3P22223 MTCO3P11-201ENST00000455103 774 ntBASIC3.59□□□□□ -1.83
CDH3P22223 UBDP1-202ENST00000457888 382 ntBASIC3.59□□□□□ -1.83
CDH3P22223 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH3P22223 AC093281.2-201ENST00000510153 597 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH3P22223 AC010265.1-201ENST00000513509 211 ntBASIC3.59□□□□□ -1.83
CDH3P22223 RN7SKP18-201ENST00000516005 275 ntBASIC3.59□□□□□ -1.83
CDH3P22223 RNU6-1073P-201ENST00000517182 106 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH3P22223 AC007991.1-201ENST00000522680 631 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC008015.1-201ENST00000555505 465 ntBASIC3.59□□□□□ -1.83
CDH3P22223 HSPE1P3-201ENST00000559254 309 ntBASIC3.59□□□□□ -1.83
CDH3P22223 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH3P22223 AL845331.3-202ENST00000562856 261 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC012182.1-201ENST00000570133 895 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH3P22223 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH3P22223 MAGOH2P-202ENST00000584384 429 ntBASIC3.59□□□□□ -1.83
CDH3P22223 BRDTP1-201ENST00000605735 677 ntBASIC3.59□□□□□ -1.83
CDH3P22223 SNORA51-201ENST00000606420 132 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH3P22223 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH3P22223 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH3P22223 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH3P22223 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH3P22223 CYP3A51P-201ENST00000633513 256 ntBASIC3.59□□□□□ -1.83
CDH3P22223 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH3P22223 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH3P22223 AC103706.2-201ENST00000638080 240 ntBASIC3.59□□□□□ -1.83
CDH3P22223 OR8B1P-202ENST00000641132 1178 ntBASIC3.59□□□□□ -1.83
CDH3P22223 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CDH3P22223 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.59□□□□□ -1.84
CDH3P22223 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.59□□□□□ -1.84
CDH3P22223 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CDH3P22223 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH3P22223 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH3P22223 RPL7P26-201ENST00000333817 754 ntBASIC3.58□□□□□ -1.84
CDH3P22223 Y_RNA.169-201ENST00000363745 96 ntBASIC3.58□□□□□ -1.84
CDH3P22223 SNORD82-201ENST00000365530 70 ntBASIC3.58□□□□□ -1.84
CDH3P22223 RNU6-339P-201ENST00000384310 107 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AL391417.1-201ENST00000404100 426 ntBASIC3.58□□□□□ -1.84
CDH3P22223 FNDC3CP-201ENST00000420795 1155 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH3P22223 AL389915.1-201ENST00000422463 466 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AL953862.1-201ENST00000423016 168 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH3P22223 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 RPS3AP46-201ENST00000448352 682 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 AC097493.1-201ENST00000463958 372 ntBASIC3.58□□□□□ -1.84
CDH3P22223 SYPL1P1-201ENST00000473622 768 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.58□□□□□ -1.84
CDH3P22223 AC114981.1-201ENST00000503897 678 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC026412.2-201ENST00000512270 1075 ntBASIC3.58□□□□□ -1.84
CDH3P22223 MTCO2P32-201ENST00000514865 403 ntBASIC3.58□□□□□ -1.84
CDH3P22223 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
CDH3P22223 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 SUMO2P20-201ENST00000520803 283 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 AP004371.1-201ENST00000525240 214 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 AC008011.1-201ENST00000545989 227 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AL121766.1-201ENST00000547436 487 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH3P22223 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH3P22223 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH3P22223 BNIP3P33-201ENST00000598912 569 ntBASIC3.58□□□□□ -1.84
CDH3P22223 AC006539.2-201ENST00000601729 572 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms